diff options
Diffstat (limited to 'build_sample.sh')
| -rwxr-xr-x | build_sample.sh | 76 |
1 files changed, 63 insertions, 13 deletions
diff --git a/build_sample.sh b/build_sample.sh index c7020cf..70263d1 100755 --- a/build_sample.sh +++ b/build_sample.sh @@ -6,16 +6,20 @@ # # Aaron LI # Created: 2016-03-02 -# Updated: 2016-04-26 +# Updated: 2016-06-06 # -# Changelog: +# Change log: +# 2016-06-06: +# * Add argument "OWNER" +# * Split out function "copy_mass_files()" +# * Copy the `mass` related files # 2016-04-26: # * Add flag "UPDATE_MODE" -# * Choose the correct 'img' directory for ZZH's data +# * Choose the correct `img` directory for ZZH's data # * Simplify the argument processing # 2016-04-15: +# * Replace "_" with "-" in NAME # * Add support for zzh's sample -# * Convert "_" to "-" in NAME # analyze_path() { @@ -62,17 +66,42 @@ analyze_path() { } +# copy mass-related files +copy_mass_files() { + _mass_dir="$1" + _target_dir="$2" + _owner="$3" + ( \ + cd ${repro_dir}/mass; \ + if [ "${_owner}" = "lwt" ]; then \ + cp -av fitting_*.conf global.cfg wang2012_param.txt \ + flux_sbp.txt radius_sbp.txt sbprofile.txt \ + [a-z]*_center.* summary_*.* final_result.txt \ + ${target_dir}/; \ + cp -Lv tcl_temp_profile.txt ${target_dir}/; \ + else \ + cp -av global.cfg sbp.cfg param_wang.txt \ + [a-z]*_center.* summary_*.* \ + final_result.txt ${target_dir}/; \ + cp -Lv Tprofile.dat radius.dat sbp2.dat sbp3.dat ${target_dir}/; \ + fi; \ + ) + unset _mass_dir _target_dir _owner +} + + case "$1" in -[hH]*) echo "Usage:" - echo " `basename $0` <dest_root_dir> <repro_dir1> ..." + echo " `basename $0` <lwt|zzh> <dest_root_dir> <repro_dir1> ..." exit 1 ;; esac UPDATE_MODE="YES" -DEST_ROOT="$1" +OWNER="$1" +DEST_ROOT="$2" if [ -n "${UPDATE_MODE}" -a ! -d "${DEST_ROOT}" ]; then echo "UPDATE MODE: '${DEST_ROOT}' dose not exist" exit 2 @@ -80,12 +109,11 @@ fi [ ! -d "${DEST_ROOT}" ] && mkdir -v "${DEST_ROOT}" INIT_DIR=`pwd -P` -while [ ! -z "$2" ]; do - repro_dir="$2" +while [ ! -z "$3" ]; do + repro_dir="$3" shift OI=`analyze_path "${repro_dir}" | grep '^oi:' | awk '{ print $2 }'` NAME=`analyze_path "${repro_dir}" | grep '^name:' | awk '{ print $2 }'` - OWNER=`analyze_path "${repro_dir}" | grep '^owner:' | awk '{ print $2 }'` # avoid "_" in name NAME=`echo "${NAME}" | tr '_' '-'` echo "********* ${NAME}_oi${OI} *********" @@ -98,12 +126,15 @@ while [ ! -z "$2" ]; do fi [ ! -d "${DEST}/repro" ] && mkdir -pv ${DEST}/repro cd "${DEST}/repro" - # simply copy the whole sub-directories + # copy the re-processed evt2 files cp -av ${repro_dir}/acisf*.fits . cp -av ${repro_dir}/acisf*.lis ${repro_dir}/pcadf*.fits . + # copy the INFO.json file if present cp -av ${repro_dir}/*_INFO.json . + # copy the cleaned evt2 files and background files cp -av ${repro_dir}/evt . cp -av ${repro_dir}/bkg . + # copy the `img` directory if [ "${OWNER}" = "lwt" ]; then cp -av ${repro_dir}/img . elif [ "${OWNER}" = "zzh" ]; then @@ -115,10 +146,29 @@ while [ ! -z "$2" ]; do echo "WARNING: '${img_dir}/sbprofile.txt' does not exists" cp -av ${repro_dir}/img . fi + else + echo "ERROR: unknown source owner: ${OWNER}" fi - # apply clean up + # copy the `mass` related files + mkdir ./mass + cd ./mass + target_dir=`pwd -P` + if [ "${OWNER}" = "lwt" ]; then + copy_mass_files ${repro_dir}/mass ${target_dir} ${OWNER} + elif [ "${OWNER}" = "zzh" ]; then + if [ -d "${mass_dir}/../evt2/mass" ]; then + copy_mass_files ${repro_dir}/../evt2/mass ${target_dir} ${OWNER} + elif [ -d "${repro_dir}/mass" ]; then + copy_mass_files ${repro_dir}/mass ${target_dir} ${OWNER} + else + echo "ERROR: no mass directory found!" + fi + else + echo "ERROR: unknown source owner: ${OWNER}" + fi + cd ${target_dir} + # clean up the copied products find . \( -iname '*_bak' -o -iname '_tmp*' \) -delete find . -type l -iname '*.dat' -delete - cd "${INIT_DIR}" + cd ${INIT_DIR} done - |