#!/usr/bin/env python3 # -*- coding: utf-8 -*- # # Extract R500 from the '*_INFO.json' file, and center coordinate from # existing "sbprofile.reg", and then make the circle regions w.r.t R500 # in order to visualize the FoV coverage of the observations. # # Aaron LI # Created: 2016-04-15 # Updated: 2016-04-28 # # Changelog: # 2016-04-28: # * Add functions "get_r500()" and "get_center()" for code reuse # 2016-04-16: # * Fix R500 unit (convert from kpc to Chandra ACIS pixel) # import sys import glob import os import re import json import argparse def get_r500(info): """ Get the R500 value (in unit pixel and kpc), as well as the value of "kpc_per_pix" """ if isinstance(info, str): json_str = open(info_json).read().rstrip().rstrip(",") info = json.loads(json_str) if "R500 (kpc)" in info.keys(): # LWT's r500_kpc = float(info["R500 (kpc)"]) elif "R500" in info.keys(): # ZZH's r500_kpc = float(info["R500"]) else: raise ValueError("Cannot get R500") # Convert kpc to Chandra ACIS pixel rmax_sbp_pix = float(info["Rmax_SBP (pixel)"]) rmax_sbp_kpc = float(info["Rmax_SBP (kpc)"]) kpc_per_pix = rmax_sbp_kpc / rmax_sbp_pix r500_pix = r500_kpc / kpc_per_pix results = { "r500_kpc": r500_kpc, "r500_pix": r500_pix, "kpc_per_pix": kpc_per_pix, } return results def get_center(regfile): """ Get the center coordinate from the given region file """ regions = open(regfile).readlines() regions = list(filter(lambda x: re.match(r"^(circle|annulus|pie).*", x, re.I), regions)) xc, yc = map(float, re.split(r"[(,)]", regions[0])[1:3]) return (xc, yc) def frange(x, y, step): while x < y: yield x x += step def main(): parser = argparse.ArgumentParser(description="Make R500 circle regions") parser.add_argument("-j", "--json", dest="json", required=False, help="the *_INFO.json file (default: find ../*_INFO.json)") parser.add_argument("-i", "--regin", dest="regin", required=False, default="sbprofile.reg", help="region from which to extract the center coordinate " + \ "(default: sbprofile.reg)") parser.add_argument("-o", "--regout", dest="regout", required=False, default="r500.reg", help="output region filename (default: r500.reg)") args = parser.parse_args() # default "*_INFO.json" info_json = glob.glob("../*_INFO.json")[0] if args.json: info_json = args.json r500 = get_r500(info_json) r500_kpc = r500["r500_kpc"] r500_pix = r500["r500_pix"] print("R500: %.2f (kpc), %.2f (pixel)" % (r500_kpc, r500_pix)) # get center coordinate xc, yc = get_center(args.regin) # output region r500_regions = [ '# Region file format: DS9 version 4.1', 'global color=white width=1 font="helvetica 10 normal roman"', 'physical', ] region_fmt = "circle(%s,%s,{0:.7f}) # text={{{1:.1f} R500 = {2:.1f} pix}}" \ % (xc, yc) r500_regions.extend([ region_fmt.format(r500_pix*ratio, ratio, r500_pix*ratio) for ratio in frange(0.1, 1.0, 0.1) ]) with open(args.regout, "w") as outfile: outfile.write("\n".join(r500_regions) + "\n") if __name__ == "__main__": main()