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* fit_sbp.sh: update comment; use cosmo_calcAaron LI2016-06-071-3/+9
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* Add previous uncommited analyze_lxfx.pyAaron LI2016-06-071-29/+54
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* Merge fit_nfwmass_{d,}beta.sh => fit_nfwmass.shAaron LI2016-06-074-467/+117
| | | | | * Also remove 'fit_mass.sh' * Update README.md accordingly
* Remove loop_lx.sh (superseded by calc_lxfx_wrapper.sh)Aaron LI2016-06-071-73/+0
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* Merge analyze_{lf}x.py => analyze_lxfx.py and update.Aaron LI2016-06-073-46/+20
| | | | | | | * Merge analyze_{lf}x.py => analyze_lxfx.py * Update analyze_lxfx.py to use arguments * Update calc_lxfx.sh accordingly * Add "output" comments to calc_lxfx.sh
* Remove 'sample.cfg'; see 'files/{fitting_mass.conf,fitting_sbp.conf}'Aaron LI2016-06-071-11/+0
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* Remove unused filesAaron LI2016-06-073-416/+0
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* mass_profile: merge 'calc_lx_{d,}beta.sh' => 'calc_lxfx.sh'Aaron LI2016-06-075-332/+187
| | | | | | * Rename 'calc_lxfx_simple.sh' to 'calc_lxfx_wrapper.sh' * Update 'calc_lxfx_wrapper.sh' accordingly * Update README.md accordingly
* Add a warning that these scripts are updated but currently UNTESTEDAaron LI2016-06-071-0/+8
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* Add README.md for mass_profile toolsAaron LI2016-06-072-25/+32
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* mass_profile/fit_{d,}beta_sbp.cpp: fix wrong value of 'mu'Aaron LI2016-06-072-50/+54
| | | | | | * Fix the 'mu' value to the more accurate '1.155' (see also the email from Junhua GU on 2015-07-27) * Add reference for the 'mu': molecular weight per electron
* mass_profile/projector.hpp: fix wrong formulaAaron LI2016-06-071-10/+16
| | | | | | | | | * Fix the wrong '*' operator with the correct '/' operator (see the email from Junhua GU on 2015-07-27) * Fix the wrong variable 'nrad' with the correct 'nsph' (see the email from Junhua GU on 2015-07-27) * Update the value of 'ne_np_ratio' * Add reference for the 'ne_np_ratio'
* Add TODO items into README.mdAaron LI2016-05-281-0/+8
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* Update README.mdAaron LI2016-05-281-7/+32
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* Move tools/cosmo_calc to another repo 'atoolbox'Aaron LI2016-05-2811-595/+2
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* Update path to the submodule opt_utilitiesAaron LI2016-05-281-1/+1
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* README.md: fix markdown syntaxAaron LI2016-05-271-6/+16
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* Renamed HOWTO_chandra_acis_analysis.txtAaron LI2016-05-271-0/+0
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* Add mass_profile toolsAaron LI2016-05-2779-0/+11440
| | | | | | | | | * These tools are mainly use to calculate the total gravitational mass profile, as well as the intermediate products (e.g., surface brightness profile fitting, gas density profile, NFW fitting, etc.) * There are additional tools for calculating the luminosity and flux. * These tools mainly developed by Junhua GU, and contributed by Weitian (Aaron) LI, and Zhenghao ZHU.
* Unstage mass_profileAaron LI2016-05-271-0/+0
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* Add license descriptionAaron LI2016-05-271-2/+10
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* Update gitignoreAaron LI2016-05-272-1/+4
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* Add .gitignore for tools/cosmo_calcAaron LI2016-05-275-0/+2
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* Add submodule opt_utilitiesAaron LI2016-05-272-0/+3
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* Minor adjust to .gitignoreAaron LI2016-05-271-3/+0
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* Unstage opt_utilitiesAaron LI2016-05-271-0/+0
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* Add MIT licenseAaron LI2016-05-271-0/+23
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* ciao_fill_sources.sh: add clobber=yes to skyfovAaron LI2016-04-121-2/+2
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* ciao_fill_sources.sh: generate fov file since some obs. do not provide the ↵Aaron LI2016-04-121-4/+10
| | | | fov1.fits
* scripts/ciao_fill_sources.sh: use deflared event instead of the cleaned oneAaron LI2016-04-111-6/+10
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* scripts/ciao_img_rotcrop.sh: add caveat about dmregrid2Aaron LI2016-04-111-0/+18
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* Add scripts/ciao_fill_sources.shAaron LI2016-04-111-0/+182
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* scripts/ciao_img_rotcrop.sh: fix CCD sizesAaron LI2016-04-111-4/+4
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* scripts/ciao_img_rotcrop.sh: update crop sizes; update docAaron LI2016-04-111-12/+19
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* Remove scripts/ciao_mkimg_det.shAaron LI2016-04-111-46/+0
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* chandra_update_xpeak2.sh: fix the wrong filenameAaron LI2015-11-221-1/+1
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* chandra_update_xpeak2.sh: add to find X-peak in the cleaned imageAaron LI2015-11-221-0/+311
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* chandra_update_xpeak.sh: re-arrange default parametersAaron LI2015-11-221-13/+26
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* chandra_json2csv_v3.py: Rewrite; Automatically get keys; Use python3Aaron LI2015-11-091-249/+36
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* chandra_update_xpeak.sh: default aconvolve and update Gaussian kernelAaron LI2015-11-081-11/+16
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* chandra_update_xpeak.sh: fix typoAaron LI2015-11-081-2/+2
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* chandra_update_xpeak.sh: Also add offset to info jsonAaron LI2015-11-081-2/+5
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* Add new script "chandra_update_xpeak.sh"Aaron LI2015-11-081-0/+313
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* chandra_xcentroid.sh: Use previously generated skyfov.fitsAaron LI2015-11-081-8/+7
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* Add scripts "ciao_img_rotcrop.sh" and "ciao_mkimg_det.sh".Aaron LI2015-11-082-0/+127
| | | | | | | | | Writen for ZHANG Chenhao to generate rotated and cropped image for power spectrum analysis. WARNING: the image generated by "ciao_mkimg_det.sh" in the DET coordinate is very different than that in SKY coordinate. Watch out for scientific usage!!!
* ciao_expcorr.sh: Properly handle the 'xygrid' parameter of "fluximage"Aaron LI2015-11-081-8/+18
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* Update various script to use localized pfiles to avoid collisons.Aaron LI2015-06-0325-627/+1122
| | | | | | | | | * Copy needed pfiles to current working directory, and set environment variable $PFILES to use these first. Thus multiple instance of CIAO tools can be run at the same without pfiles collsions. * Replace 'ls' with '\ls', 'grep' with '\grep' * Many minor updates/fixes
* Updated ciao_calc_ct.sh, ciao_expcorr.sh, ciao_r500avgt.sh, ciao_sbp.shAaron LI2015-05-274-76/+78
| | | | | | | | | | | ciao_r500avgt.sh, ciao_calc_ct.sh: Updated to also find '.rmf' & '.arf' files in addition to '.wrmf' & '.warf'. ciao_sbp.sh: Skip skyfov generation if already exists Renamed parameter 'aspec' to 'aspect' ciao_expcorr.sh Added 'aspect' parameter for skyfov to fix the 'FoV shift bug'
* Updated 'ciao_expcorr_sbp.sh':Weitian LI2015-03-051-32/+30
| | | | | | * Added exit code check for the 'EXPCORR_SCRIPT' and 'EXTRACT_SBP_SCRIPT' * Removed the code of 'spc_fit.cfg' generation * Removed the code to make links of sbp2.dat, sbp3.dat and radius.dat
* Update 'chandra_gensbpreg.sh'.Weitian LI2015-03-053-8/+36
| | | | | | | | | * 'chandra_gensbpreg.sh': - Add '1' to denominators when calculate STN to avoid division by zero - Add script description * 'empty_v3.json': - Add 'Unified Name' field * Rename 'calc_lx_simple_v2.sh' -> 'calc_lx_simple.sh'.