#!/bin/bash echo $# if [ $# -gt 0 ] then : else echo "Usage:$0 [c]" echo "If central value only, append a \"c\"" exit fi export PGPLOT_FONT=`locate grfont.dat|head -1` cfg_file=$1 base_path=`dirname $0` echo $base_path #initialize profile type name t_profile_type=`grep t_profile $cfg_file|awk '{print $2}'` #initialize data file name t_data_file=`grep t_data_file $cfg_file|awk '{print $2}'` #initialize sbp config file sbp_cfg=`grep sbp_cfg $cfg_file|awk '{print $2}'` #initialize the temperature profile file T_file=`grep '^T_file' $sbp_cfg|awk '{print $2}'` #initialize the rmin_kpc for nfw mass profile fitting nfw_rmin_kpc=`grep '^nfw_rmin_kpc' $cfg_file|awk '{print $2}'` #echo $t_profile_type cm_per_pixel=`grep '^cm_per_pixel' $sbp_cfg|awk '{print $2}'` da=`python -c "print($cm_per_pixel/(.492/3600/180*3.1415926))"` #determine which temperature profile to be used, and fit the T profile if [ $t_profile_type == wang2012 ] then t_param_file=`grep t_param_file $cfg_file|awk '{print $2}'` $base_path/fit_wang2012_model $t_data_file $t_param_file $cm_per_pixel mv -f wang2012_dump.qdp ${T_file} else echo temperature profile name invalid! exit fi cfunc_file=`grep '^cfunc_file' ${sbp_cfg} |awk '{print $2}'` z=`grep '^z' ${sbp_cfg}|awk '{print $2}'` dl=`python -c "print($da*(1+$z)**2)"` abund=`grep '^abund' ${cfg_file} |awk '{print $2}'` nh=`grep '^nh' ${cfg_file} |awk '{print $2}'` $base_path/coolfunc_calc_bolo.sh ${T_file} $abund $nh $z cfunc_bolo.dat $base_path/coolfunc_calc.sh ${T_file} $abund $nh $z $cfunc_file mv flux_cnt_ratio.txt flux_cnt_ratio_center.txt #fit sbp $base_path/fit_beta_sbp $sbp_cfg $base_path/fit_nfw_mass mass_int.dat $z $nfw_rmin_kpc echo $cfunc_file #exit #store central valu mv sbp_fit.qdp sbp_fit_center.qdp mv nfw_dump.qdp mass_int_center.qdp mv overdensity.qdp overdensity_center.qdp mv gas_mass_int.qdp gas_mass_int_center.qdp mv nfw_param.txt nfw_param_center.qdp mv beta_param.txt beta_param_center.txt mv rho_fit.dat rho_fit_center.dat #calculate cooling time echo $dl $base_path/cooling_time rho_fit_center.dat $T_file cfunc_bolo.dat $dl $cm_per_pixel >cooling_time.dat sbp_data_file=`grep sbp_file $sbp_cfg|awk '{print $2}'` radius_sbp_file=`grep radius_sbp_file ${cfg_file}|awk '{print $2}'` if [ x"$radius_sbp_file" == x ] then echo "Error, must have radius_sbp_file assigned, this file should be a 4-column file, which contains the radius, radius err, sbp, and sbp err" exit fi cat ${radius_sbp_file} | sed 's/#.*$//' | grep -Ev '^\s*$' > .tmp.txt mv .tmp.txt ${radius_sbp_file} #radius to calculate tcool, not the cooling time! rcool=`$base_path/analyze_mass_profile.py 500 c|grep ^r500|awk -F "=" '{print .048*$2}'` if [ $# -eq 2 ] then rm -f center_only_results.txt $base_path/analyze_mass_profile.py 200 c |tee -a center_only_results.txt $base_path/analyze_mass_profile.py 500 c |tee -a center_only_results.txt $base_path/analyze_mass_profile.py 1500 c |tee -a center_only_results.txt $base_path/analyze_mass_profile.py 2500 c |tee -a center_only_results.txt $base_path/extract_tcool.py $rcool |tee -a center_only_results.txt $base_path/fg_2500_500.py c |tee -a center_only_results.txt exit fi rm -f summary_shuffle_mass_profile.qdp rm -f summary_overdensity.qdp rm -f summary_mass_profile.qdp rm -f summary_gas_mass_profile.qdp #100 times of Monte-carlo simulation to determine error #just repeat above steps for i in `seq 1 100` do echo $t_data_file $base_path/shuffle_T.py $t_data_file temp_shuffled_t.dat $base_path/shuffle_sbp.py $sbp_data_file temp_shuffled_sbp.dat #t_data_file=temp_shuffled_t.dat #exit if [ $t_profile_type == wang2012 ] then t_param_file=`grep t_param_file $cfg_file|awk '{print $2}'` $base_path/fit_wang2012_model temp_shuffled_t.dat $t_param_file $cm_per_pixel mv -f wang2012_dump.qdp ${T_file} else echo temperature profile name invalid! exit fi #exit echo >temp_sbp.cfg cat $sbp_cfg|while read l do if echo $l|grep sbp_file >/dev/null then echo sbp_file temp_shuffled_sbp.dat >>temp_sbp.cfg elif echo $l|grep T_file >/dev/null then echo T_file ${T_file} >>temp_sbp.cfg else echo $l >>temp_sbp.cfg fi done $base_path/coolfunc_calc.sh ${T_file} $abund $nh $z $cfunc_file $base_path/fit_beta_sbp temp_sbp.cfg $base_path/fit_nfw_mass mass_int.dat $z $nfw_rmin_kpc cat nfw_dump.qdp >>summary_mass_profile.qdp echo no no no >>summary_mass_profile.qdp cat overdensity.qdp >>summary_overdensity.qdp echo no no no >>summary_overdensity.qdp cat gas_mass_int.qdp >>summary_gas_mass_profile.qdp echo no no no >>summary_gas_mass_profile.qdp done #analys the errors $base_path/analyze_mass_profile.py 200 $base_path/analyze_mass_profile.py 500 $base_path/analyze_mass_profile.py 1500 $base_path/analyze_mass_profile.py 2500 r500=`$base_path/analyze_mass_profile.py 500|grep r500|awk '{print $2}'` #$base_path/calc_lx $radius_sbp_file flux_cnt_ratio_center.txt $z $r500 $t_data_file r200=`$base_path/analyze_mass_profile.py 200|grep r200|awk '{print $2}'` r1500=`$base_path/analyze_mass_profile.py 1500|grep r1500|awk '{print $2}'` r2500=`$base_path/analyze_mass_profile.py 2500|grep r2500|awk '{print $2}'` #$base_path/calc_lx $radius_sbp_file flux_cnt_ratio_center.txt $z $r200 $t_data_file r500e=`$base_path/analyze_mass_profile.py 500|grep '^r500' 2>/dev/null|awk '{print $2,$3}'` m500e=`$base_path/analyze_mass_profile.py 500|grep '^m500' 2>/dev/null|awk '{print $2,$3}'` L500=`$base_path/calc_lx $radius_sbp_file flux_cnt_ratio_center.txt $z $r500 Tprofile.dat 2>/dev/null|awk '{print $2,$3,$4}'` mg500e=`$base_path/analyze_mass_profile.py 500|grep '^gas_m' 2>/dev/null|awk '{print $2,$3}'` fg500e=`$base_path/analyze_mass_profile.py 500|grep '^gas_fraction' 2>/dev/null|awk '{print $2,$3}'` r200e=`$base_path/analyze_mass_profile.py 200|grep '^r200' 2>/dev/null|awk '{print $2,$3}'` m200e=`$base_path/analyze_mass_profile.py 200|grep '^m200' 2>/dev/null|awk '{print $2,$3}'` L200=`$base_path/calc_lx $radius_sbp_file flux_cnt_ratio_center.txt $z $r200 Tprofile.dat 2>/dev/null|awk '{print $2,$3,$4}'` mg200e=`$base_path/analyze_mass_profile.py 200|grep '^gas_m' 2>/dev/null|awk '{print $2,$3}'` fg200e=`$base_path/analyze_mass_profile.py 200|grep '^gas_fraction' 2>/dev/null|awk '{print $2,$3}'` r2500e=`$base_path/analyze_mass_profile.py 2500|grep '^r2500' 2>/dev/null|awk '{print $2,$3}'` m2500e=`$base_path/analyze_mass_profile.py 2500|grep '^m2500' 2>/dev/null|awk '{print $2,$3}'` L2500=`$base_path/calc_lx $radius_sbp_file flux_cnt_ratio_center.txt $z $r2500 Tprofile.dat 2>/dev/null|awk '{print $2,$3,$4}'` mg2500e=`$base_path/analyze_mass_profile.py 2500|grep '^gas_m' 2>/dev/null|awk '{print $2,$3}'` fg2500e=`$base_path/analyze_mass_profile.py 2500|grep '^gas_fraction' 2>/dev/null|awk '{print $2,$3}'` r1500e=`$base_path/analyze_mass_profile.py 1500|grep '^r1500' 2>/dev/null|awk '{print $2,$3}'` m1500e=`$base_path/analyze_mass_profile.py 1500|grep '^m1500' 2>/dev/null|awk '{print $2,$3}'` L1500=`$base_path/calc_lx $radius_sbp_file flux_cnt_ratio_center.txt $z $r1500 Tprofile.dat 2>/dev/null|awk '{print $2,$3,$4}'` mg1500e=`$base_path/analyze_mass_profile.py 1500|grep '^gas_m' 2>/dev/null|awk '{print $2,$3}'` fg1500e=`$base_path/analyze_mass_profile.py 1500|grep '^gas_fraction' 2>/dev/null|awk '{print $2,$3}'` echo "******************" echo "Final results:" echo "******************" echo echo rm -f final_result.txt echo r500= $r500e kpc |tee -a final_result.txt echo m500= $m500e M_sun |tee -a final_result.txt echo L500= $L500 erg/s |tee -a final_result.txt echo gas mass 500= $mg500e M_sun |tee -a final_result.txt echo gas fractho 500= $fg500e x100% |tee -a final_result.txt echo r200= $r200e kpc |tee -a final_result.txt echo m200= $m200e M_sun |tee -a final_result.txt echo L200= $L200 erg/s |tee -a final_result.txt echo gas mass 200= $mg200e M_sun |tee -a final_result.txt echo gas fractho 200= $fg200e x100% |tee -a final_result.txt echo r1500= $r1500e kpc |tee -a final_result.txt echo m1500= $m1500e M_sun |tee -a final_result.txt echo L1500= $L1500 erg/s |tee -a final_result.txt echo gas mass 1500= $mg1500e M_sun |tee -a final_result.txt echo gas fractho 1500= $fg1500e x100% |tee -a final_result.txt echo r2500= $r2500e kpc |tee -a final_result.txt echo m2500= $m2500e M_sun |tee -a final_result.txt echo L2500= $L2500 erg/s |tee -a final_result.txt echo gas mass 2500= $mg2500e M_sun |tee -a final_result.txt echo gas fractho 2500= $fg2500e x100% |tee -a final_result.txt $base_path/extract_tcool.py $rcool |tee -a final_result.txt $base_path/fg_2500_500.py |tee -a final_result.txt