#!/bin/sh
#
unalias -a
export LC_COLLATE=C
###########################################################
## based on `ciao_r500avgt'                              ##
## for calculating the `cooling time '                   ##
## within (0.-0.048 r500) region                         ##
##                                                       ##
## Junhua Gu                                             ##
## August 22, 2012                                       ##
##                                                       ##
## LIweitiaNux                                           ##
## 2013/04/28                                            ##
###########################################################

###########################################################
## ChangeLogs
##   2014/06/18: 'cooling_time2.sh' -> 'ciao_calc_ct.sh'
###########################################################

## about, used in `usage' {{{
VERSION="v1.1"
UPDATE="2012-08-26"
## about }}}

## error code {{{
ERR_USG=1
ERR_DIR=11
ERR_EVT=12
ERR_BKG=13
ERR_REG=14
ERR_ASOL=21
ERR_BPIX=22
ERR_PBK=23
ERR_MSK=24
ERR_BKGTY=31
ERR_SPEC=32
ERR_ARF=51
ERR_RMF=52
ERR_UNI=61
## error code }}}

## usage, help {{{
case "$1" in
    -[hH]*|--[hH]*)
        printf "usage:\n"
        printf "    `basename $0` basedir=<repro_dir> evt=<evt2_clean> r500=<r500_kpc> regin=<input_reg> regout=<output_reg> bkgd=<blank_evt | lbkg_reg | bkg_spec> nh=<nH> z=<redshift> arf=<warf_file> rmf=<wrmf_file> [ grpcmd=<grppha_cmd> log=<log_file> ]\n"
        printf "\nversion:\n"
        printf "${VERSION}, ${UPDATE}\n"
        exit ${ERR_USG}
        ;;
esac
## usage, help }}}

## comology calculator {{{
## XXX: MODIFY THIS TO YOUR OWN CASE
## and make sure this `calc' is executable
## NOTES: use `$HOME' instead of `~' in path
BASE_PATH=`dirname $0`
COSCALC="`which cosmo_calc calc_distance 2>/dev/null | head -n 1`"
if [ -z "${COSCALC}" ] || [ ! -x ${COSCALC} ]; then
    printf "ERROR: \`COSCALC: ${COSCALC}' neither specified nor executable\n"
    exit 255
fi
## }}}

## default parameters {{{
# default `event file' which used to match `blanksky' files
#DFT_EVT="_NOT_EXIST_"
DFT_EVT="`ls evt2*_clean.fits 2> /dev/null`"
# default `bkgd', use `bkgcorr_blanksky*' corrected bkg spectrum
DFT_BKGD="`ls bkgcorr_blanksky_*.pi 2> /dev/null`"
# default basedir
DFT_BASEDIR="../.."
# default info_json pattern
DFT_JSON_PAT="*_INFO.json"
# default `radial region file'
#DFT_REG_IN="_NOT_EXIST_"
DFT_REG_IN="rspec.reg"
# default output region file (0.1-0.5 r500 region)
DFT_REG_OUT="cooling.reg"
# default ARF/RMF, the one of the outmost region
DFT_ARF="`ls r1_*.warf 2> /dev/null`"
DFT_RMF="`ls r1_*.wrmf 2> /dev/null`"

# default `group command' for `grppha'
#DFT_GRP_CMD="group 1 128 2 129 256 4 257 512 8 513 1024 16"
DFT_GRP_CMD="group min 20"
# default `log file'
DFT_LOGFILE="cooling_`date '+%Y%m%d'`.log"

INNER=0.0
OUTER=0.048
CT_RES="cooling_results.txt"
# default output xspec scripts
XSPEC_SCRIPT="xspec_cooling.xcm"
# deproj xspec script, generated by `deproj_spectra'
# from which get `nh' and `redshift'
XSPEC_DEPROJ="xspec_deproj.xcm"
## default parameters }}}

## functions {{{
# process commandline arguments
# cmdline arg format: `KEY=VALUE'
getopt_keyval() {
    until [ -z "$1" ]
    do
        key=${1%%=*}                    # extract key
        val=${1#*=}                     # extract value
        keyval="${key}=\"${val}\""
        echo "## getopt: eval '${keyval}'"
        eval ${keyval}
        shift                           # shift, process next one
    done
}

## background renormalization (BACKSCAL) {{{
# renorm background according to particle background
# energy range: 9.5-12.0 keV (channel: 651-822)
CH_LOW=651
CH_HI=822
pb_flux() {
    punlearn dmstat
    COUNTS=`dmstat "$1[channel=${CH_LOW}:${CH_HI}][cols COUNTS]" | grep -i 'sum:' | awk '{ print $2 }'`
    punlearn dmkeypar
    EXPTIME=`dmkeypar $1 EXPOSURE echo=yes`
    BACK=`dmkeypar $1 BACKSCAL echo=yes`
    # fix `scientific notation' bug for `bc'
    EXPTIME_B=`echo ${EXPTIME} | sed 's/[eE]/\*10\^/' | sed 's/+//'`
    BACK_B=`echo "( ${BACK} )" | sed 's/[eE]/\*10\^/' | sed 's/+//'`
    PB_FLUX=`echo "scale = 16; ${COUNTS} / ${EXPTIME_B} / ${BACK_B}" | bc -l`
    echo ${PB_FLUX}
}

bkg_renorm() {
    # $1: src spectrum, $2: back spectrum
    PBFLUX_SRC=`pb_flux $1`
    PBFLUX_BKG=`pb_flux $2`
    BACK_OLD=`dmkeypar $2 BACKSCAL echo=yes`
    BACK_OLD_B=`echo "( ${BACK_OLD} )" | sed 's/[eE]/\*10\^/' | sed 's/+//'`
    BACK_NEW=`echo "scale = 16; ${BACK_OLD_B} * ${PBFLUX_BKG} / ${PBFLUX_SRC}" | bc -l`
    printf "\`$2': BACKSCAL:\n"
    printf "    ${BACK_OLD} --> ${BACK_NEW}\n"
    punlearn dmhedit
    dmhedit infile=$2 filelist=none operation=add \
        key=BACKSCAL value=${BACK_NEW} comment="old value: ${BACK_OLD}"
}
## bkg renorm }}}
## functions end }}}

## parameters {{{
# process cmdline args using `getopt_keyval'
getopt_keyval "$@"

## check log parameters {{{
if [ ! -z "${log}" ]; then
    LOGFILE="${log}"
else
    LOGFILE=${DFT_LOGFILE}
fi
printf "## use logfile: \`${LOGFILE}'\n"
[ -e "${LOGFILE}" ] && mv -fv ${LOGFILE} ${LOGFILE}_bak
TOLOG="tee -a ${LOGFILE}"
echo "process script: `basename $0`" >> ${LOGFILE}
echo "process date: `date`" >> ${LOGFILE}
## log }}}

# check given parameters
# process `nh' and `redshift' {{{
if [ ! -r "${XSPEC_DEPROJ}" ]; then
    printf "## the script \`${XSPEC_DEPROJ}' generated by \`deproj_spectra' NOT found\n" | ${TOLOG}
    printf "## please supply the value of \`nh' and \`redshift' manully\n" | ${TOLOG}
    read -p "> value of nh: " N_H
    read -p "> value of redshift: " REDSHIFT
else
    # get `nh' and `redshift' from xspec script
    LN=`grep -n 'projct\*wabs\*apec' ${XSPEC_DEPROJ} | tail -n 1 | cut -d':' -f1`
    # calc the line number of which contains `nh'
    LN_NH=`expr ${LN} + 4`
    NH_XCM=`head -n ${LN_NH} ${XSPEC_DEPROJ} | tail -n 1 | awk '{ print $1 }'`
    # calc the line number of `redshift'
    LN_RS=`expr ${LN} + 7`
    RS_XCM=`head -n ${LN_RS} ${XSPEC_DEPROJ} | tail -n 1 | awk '{ print $1 }'`
    printf "## get value of nh: \`${NH_XCM}' (from \`${XSPEC_DEPROJ}')\n" | ${TOLOG}
    printf "## get value of redshift: \`${RS_XCM}' (from \`${XSPEC_DEPROJ}')\n" | ${TOLOG}

    ## if `nh' and `redshift' supplied in cmdline, then use them
    if [ ! -z "${nh}" ]; then
        N_H=${nh}
    else
        N_H=${NH_XCM}
    fi
    # redshift
    if  [ ! -z "${z}" ]; then
        REDSHIFT=${z}
    else
        REDSHIFT=${RS_XCM}
    fi
fi
printf "## use nH: ${N_H}\n" | ${TOLOG}
printf "## use redshift: ${REDSHIFT}\n" | ${TOLOG}
# nh & redshift }}}

# check basedir & json file
if [ -d "${basedir}" ]; then
    BASEDIR=${basedir}
else
    BASEDIR=${DFT_BASEDIR}
fi
# json file
if [ ! -z "${json}" ] && [ -r "${BASEDIR}/${json}" ]; then
    JSON_FILE="${BASEDIR}/${json}"
elif [ `ls ${BASEDIR}/${DFT_JSON_PAT} 2> /dev/null | wc -l` -eq 1 ]; then
    JSON_FILE=`ls ${BASEDIR}/${DFT_JSON_PAT}`
else
    read -p "> JSON_file: " JSON_FILE
    if [ ! -r "${JSON_FILE}" ]; then
        printf "ERROR: cannot access given \`${JSON_FILE}'\n"
        exit ${ERR_JSON}
    fi
fi
printf "## use json_file: \`${JSON_FILE}'\n" | ${TOLOG}

# process `r500' {{{
R500_RAW=`grep '"R500.*kpc' ${JSON_FILE} | sed 's/.*"R500.*":\ //' | sed 's/\ *,$//'`
if [ ! -z "${r500}" ]; then
    R500_RAW=${r500}
fi
if [ -z "${R500_RAW}" ]; then
    printf "## input R500 followed with unit, e.g.: 800kpc, 400pix\n"
    read -p "> value of \`R500' (in pixel/kpc): " R500_RAW
fi
R500_VAL=`echo "${R500_RAW}" | tr -d 'a-zA-Z, '`
R500_UNI=`echo "${R500_RAW}" | tr -d '0-9, '`
printf "## get \`R500': ${R500_VAL} in unit \`${R500_UNI}'\n" | ${TOLOG}

# if in kpc, convert to pix
case "${R500_UNI}" in
    [pP]*)
        printf "## units in \`pixel', conversion not needed\n" | ${TOLOG}
        R500_PIX_B=`echo ${R500_VAL} | sed 's/[eE]/\*10\^/' | sed 's/+//'`
        ;;
    *)
        printf "## units in \`kpc', convert to \`Chandra pixel'\n" | ${TOLOG}
        KPC_PER_PIX=`${COSCALC} ${REDSHIFT} | grep 'kpc.*pix' | tr -d 'a-zA-Z_#=(),:/ '`
        # convert scientific notation for `bc'
        KPC_PER_PIX_B=`echo ${KPC_PER_PIX} | sed 's/[eE]/\*10\^/' | sed 's/+//'`
        printf "## calculated \`kpc/pixel': ${KPC_PER_PIX_B}\n"
        R500_VAL_B=`echo ${R500_VAL} | sed 's/[eE]/\*10\^/' | sed 's/+//'`
        R500_PIX_B=`echo "scale = 4; ${R500_VAL_B} / ( ${KPC_PER_PIX_B} )" | bc -l`
        ;;
esac
# calc (inner-outer R500)
R_IN=`echo "scale = 4; ${INNER} * ${R500_PIX_B}" | bc -l`
R_OUT=`echo "scale = 4; ${OUTER} * ${R500_PIX_B}" | bc -l`
printf "## R500 in units pixel: ${R500_PIX_B}\n" | ${TOLOG}
printf "## (${INNER}-${OUTER} R500) range in pixel: ${R_IN} - ${R_OUT}\n" | ${TOLOG}
# r500 }}}

# check evt file
if [ -r "${evt}" ]; then
    EVT=${evt}
elif [ -r "${DFT_EVT}" ]; then
    EVT=${DFT_EVT}
else
    read -p "> clean evt2 file: " EVT
    if [ ! -r "${EVT}" ]; then
        printf "ERROR: cannot access given \`${EVT}' evt file\n"
        exit ${ERR_EVT}
    fi
fi
printf "## use evt file: \`${EVT}'\n" | ${TOLOG}

# input and output region files {{{
if [ -r "${regin}" ]; then
    REG_IN="${regin}"
elif [ -r "${DFT_REG_IN}" ]; then
    REG_IN=${DFT_REG_IN}
else
    read -p "> previous used radial spec regfile: " REG_IN
    if [ ! -r "${REG_IN}" ]; then
        printf "ERROR: cannot access given \`${REG_IN}' region file\n"
        exit ${ERR_REG}
    fi
fi
printf "## use previous regfile: \`${REG_IN}'\n" | ${TOLOG}
if [ ! -z "${regout}" ]; then
    REG_OUT="${regout}"
else
    REG_OUT=${DFT_REG_OUT}
fi
[ -e "${REG_OUT}" ] && mv -fv ${REG_OUT} ${REG_OUT}_bak
printf "## set output regfile (0.1-0.5 r500 region): \`${REG_OUT}'\n" | ${TOLOG}

# get center position from `regin'
# only consider `pie' or `annulus'-shaped region
TMP_REG=`grep -iE '(pie|annulus)' ${REG_IN} | head -n 1`
XC=`echo ${TMP_REG} | tr -d ' ' | awk -F'[(),]' '{ print $2 }'`
YC=`echo ${TMP_REG} | tr -d ' ' | awk -F'[(),]' '{ print $3 }'`
printf "## get center coord: (${XC},${YC})\n" | ${TOLOG}
# region files }}}

# check given bkgd, determine background {{{
if [ -r "${bkgd}" ]; then
    BKGD=${bkgd}
elif [ -r "${DFT_BKGD}" ]; then
    BKGD=${DFT_BKGD}
else
    read -p "> background (blanksky_evt | lbkg_reg | bkg_spec): " BKGD
    if [ ! -r "${BKGD}" ]; then
        printf "ERROR: cannot access given \`${BKGD}'\n"
        exit ${ERR_BKG}
    fi
fi
printf "## use bkgd: \`${BKGD}'\n" | ${TOLOG}
# determine bkg type: blanksky, lbkg_reg, bkg_spec ?
# according to file type first: text / FITS
# if FITS, then get values of `HDUCLAS1' and `OBJECT'
if file -bL ${BKGD} | grep -qi 'text'; then
    printf "## given \`${BKGD}' is a \`text file'\n"
    printf "##   use it as local bkg region file\n"
    printf "##   use *LOCAL BKG SPEC*\n" | ${TOLOG}
    # just set flags, extract spectrum later
    USE_LBKG_REG=YES
    USE_BLANKSKY=NO
    USE_BKG_SPEC=NO
elif file -bL ${BKGD} | grep -qi 'FITS'; then
    printf "## given \`${BKGD}' is a \`FITS file'\n"
    # get FITS header keyword
    HDUCLAS1=`dmkeypar ${BKGD} HDUCLAS1 echo=yes`
    if [ "${HDUCLAS1}" = "EVENTS" ]; then
        # event file
        printf "##   given file is \`event'\n"
        # check if `blanksky' or `stowed bkg'
        BKG_OBJ=`dmkeypar ${BKGD} OBJECT echo=yes`
        if [ "${BKG_OBJ}" = "BACKGROUND DATASET" ] || [ "${BKG_OBJ}" = "ACIS STOWED" ]; then
            # valid bkg evt file
            printf "##   given FITS file is a valid bkgrnd file\n"
            printf "##   use *BLANKSKY*\n" | ${TOLOG}
            USE_BLANKSKY=YES
            USE_LBKG_REG=NO
            USE_BKG_SPEC=NO
            # specify `BLANKSKY'
            BLANKSKY=${BKGD}
        else
            # invalid bkg evt file
            printf "ERROR: invalid bkg evt file given\n"
            exit ${ERR_BKGTY}
        fi
    elif [ "${HDUCLAS1}" = "SPECTRUM" ]; then
        # spectrum file
        printf "##   given file is \`spectrum'\n"
        printf "##   use *BKG SPECTRUM*\n" | ${TOLOG}
        USE_BKG_SPEC=YES
        USE_BLANKSKY=NO
        USE_LBKG_REG=NO
        # specify `BKG_SPEC'
        BKG_SPEC=${BKGD}
    else
        # other type
        printf "ERROR: other type FITS given\n"
        exit ${ERR_BKGTY}
    fi
else
    printf "ERROR: given \`${BKGD}' type UNKNOWN\n"
    exit ${ERR_BKGTY}
fi
# bkgd }}}

# check `arf' and `rmf' {{{
if [ -r "${arf}" ]; then
    ARF=${arf}
elif [ -r "${DFT_ARF}" ]; then
    ARF=${DFT_ARF}
else
    read -p "> provide the ARF to use: " ARF
    if [ ! -r "${ARF}" ]; then
        printf "ERROR: cannot access given \`${ARF}'\n"
        exit ${ERR_ARF}
    fi
fi
printf "## use ARF: \`${ARF}'\n" | ${TOLOG}
# rmf
if [ -r "${rmf}" ]; then
    RMF=${rmf}
elif [ -r "${DFT_RMF}" ]; then
    RMF=${DFT_RMF}
else
    read -p "> provide the RMF to use: " RMF
    if [ ! -r "${RMF}" ]; then
        printf "ERROR: cannot access given \`${RMF}'\n"
        exit ${ERR_RMF}
    fi
fi
printf "## use RMF: \`${RMF}'\n" | ${TOLOG}
# arf & rmf }}}

# check given `grpcmd'
if [ ! -z "${grpcmd}" ]; then
    GRP_CMD="${grpcmd}"
else
    GRP_CMD="${DFT_GRP_CMD}"
fi
printf "## use grppha cmd: \`${GRP_CMD}'\n" | ${TOLOG}
## parameters }}}

##################################################
#### main
## D_A
#D_A_CM=`${COSCALC} ${REDSHIFT} | grep '^d_a_cm' | awk '{ print $2 }'`
D_A_CM=`${COSCALC} ${REDSHIFT} | grep -i 'd_a.*cm' | awk -F'=' '{ print $2 }' | awk '{ print $1 }'`
printf "D_A_CM(${REDSHIFT})= ${D_A_CM}\n"

## region related {{{
## generate the needed region file
printf "generate the output region file ...\n"
cat > ${REG_OUT} << _EOF_
# Region file format: CIAO version 1.0
pie(${XC},${YC},${R_IN},${R_OUT},0,360)
_EOF_

## open the evt file to verify or modify
printf "## check the generated pie region ...\n"
printf "## if modified, save with the same name \`${REG_OUT}' (overwrite)\n"
ds9 ${EVT} -regions ${REG_OUT} -cmap sls -bin factor 4

## check the (modified) region (pie region end angle)
printf "check the above region (for pie region end angle) ...\n"
INVALID=`grep -i 'pie' ${REG_OUT} | awk -F'[,()]' '$7 > 360'`
if [ "x${INVALID}" != "x" ]; then
    printf "*** WARNING: there are pie regions' END_ANGLE > 360\n" | ${TOLOG}
    printf "*** will to fix ...\n"
    mv -fv ${REG_OUT} ${REG_OUT}_tmp
    # using `awk' to fix
    awk -F'[,()]' '{
        if ($7 > 360) {
            printf "%s(%.2f,%.2f,%.2f,%.2f,%.2f,%.2f)\n", $1,$2,$3,$4,$5,$6,($7-360)
        }
        else {
            print $0
        }
    }' ${REG_OUT}_tmp > ${REG_OUT}
    rm -f ${REG_OUT}_tmp
fi
## region related }}}

## generate spectrum {{{
# check counts
punlearn dmlist
CNT_RC=`dmlist infile="${EVT}[sky=region(${REG_OUT})][energy=700:7000]" opt=block | grep 'EVENTS' | awk '{ print $8 }'`
if [ ${CNT_RC} -lt 500 ]; then
    F_WC=true
    WC="LOW_COUNTS"
    printf "*** WARNING: counts_in_0.048R500=${CNT_RC} < 500 ***\n"
fi

# object
printf "extract object spectrum \`${AVGT_SPEC}' ...\n"
AVGT_SPEC="${REG_OUT%.reg}.pi"
AVGT_SPEC_GRP="${AVGT_SPEC%.pi}_grp.pi"
punlearn dmextract
dmextract infile="${EVT}[sky=region(${REG_OUT})][bin PI]" \
    outfile="${AVGT_SPEC}" wmap="[bin det=8]" clobber=yes
# group spectrum
printf "group object spectrum ...\n"
grppha infile="${AVGT_SPEC}" outfile="${AVGT_SPEC_GRP}" \
    comm="${GRP_CMD} & exit" clobber=yes > /dev/null

# background
printf "generate the background spectrum ...\n"
AVGT_BKG="${AVGT_SPEC%.pi}_bkg.pi"
if [ "${USE_BLANKSKY}" = "YES" ]; then
    # use blanksky as background file
    printf "extract spectrum from blanksky ...\n"
    punlearn dmextract
    dmextract infile="${BLANKSKY}[sky=region(${REG_OUT})][bin PI]" \
        outfile=${AVGT_BKG} wmap="[bin det=8]" clobber=yes
elif [ "${USE_LBKG_REG}" = "YES" ]; then
    printf "extract local background ...\n"
    punlearn dmextract
    dmextract infile="${EVT}[sky=region(${BKGD})][bin PI]" \
        outfile=${AVGT_BKG} wmap="[bin det=8]" clobber=yes
elif [ "${USE_BKG_SPEC}" = "YES" ]; then
    printf "copy specified background spectrum ...\n"
    cp -fv ${BKG_SPEC} ${AVGT_BKG}
fi

printf "renormalize the background ...\n"
bkg_renorm ${AVGT_SPEC} ${AVGT_BKG}
## spectrum }}}

## generate XSPEC script {{{
printf "generate a XSPEC script ...\n"
[ -e "${XSPEC_SCRIPT}" ] && mv -fv ${XSPEC_SCRIPT} ${XSPEC_SCRIPT}_bak
cat > ${XSPEC_SCRIPT} << _EOF_
## XSPEC script
## spectrum analysis to get the average temperatue with (0-0.048 R500)
##
## generated by: \``basename $0`'
## date: \``date`'
##

# xspec settings
statistic chi
abund grsa
query yes

# data
data ${AVGT_SPEC_GRP}
response ${RMF}
arf ${ARF}
backgrnd ${AVGT_BKG}

# fitting range
ignore bad
ignore 0.0-0.7,7.0-**

# plot related
setplot energy

method leven 10 0.01
xsect bcmc
cosmo 70 0 0.73
xset delta 0.01
systematic 0

# model
model wabs*apec
         ${N_H}     -0.001          0          0     100000      1e+06
            1.0       0.01      0.008      0.008         64         64
            0.4      0.001          0          0          5          5
    ${REDSHIFT}      -0.01     -0.999     -0.999         10         10
            0.0       0.01          0          0      1e+24      1e+24

## xspec script end

proc calc_cooling_time {} {
    set rout ${R_OUT}
    set d_a_cm ${D_A_CM}
    fit 1000
    tclout param 4
    set z  [ lindex \$xspec_tclout 0 ]
    tclout param 2
    set T [ lindex \$xspec_tclout 0 ]
    tclout param 5
    set norm [ lindex \$xspec_tclout 0 ]
    newpar 1 0
    dummyrsp .001 100
    flux .001 100

    tclout flux
    set flux [ lindex \$xspec_tclout 0 ]
    puts "flux(0.01-100kev): \$flux"
    set rout_cm [ expr \$rout*.492/3600/180*3.14159*\$d_a_cm ]
    set V [ expr 4./3.*3.14159*\$rout_cm*\$rout_cm*\$rout_cm ]
    set nenh [ expr \$norm*1E14*4*3.14159*\$d_a_cm*\$d_a_cm*(1+\$z)*(1+\$z)*(1+\$z)*(1+\$z)/\$V ]
    set d_l_cm [ expr \$d_a_cm*(1+\$z)*(1+\$z) ]
    set ne_np_ratio 1.2
    set ne [ expr sqrt(\$nenh*\$ne_np_ratio) ]
    set lx [ expr \$flux*4*3.14159*\$d_l_cm*\$d_l_cm ]
    set kb 1.602E-9
    set ct [ expr 3./2.*(\$ne+\$ne/\$ne_np_ratio)*\$kb*\$T*\$V/\$lx ]
    set ct_gyr [ expr \$ct/(3600*24*365.25*1E9) ]
    puts "Cooling_time= \$ct_gyr Gyr"
}

fit 1000
calc_cooling_time

tclexit
_EOF_
## xspec script }}}

## invoke xspec to calc
if [ "x${F_WC}" = "xtrue" ]; then
    printf "\n*** WC: LOW_COUNTS ***\n"
    printf "*** WARNING: counts_in_0.048R500=${CNT_RC} < 500 ***\n"
else
    [ -e "${CT_RES}" ] && mv -f ${CT_RES} ${CT_RES}_bak
    printf "invoking XSPEC to calculate cooling time ...\n"
    xspec - ${XSPEC_SCRIPT} | tee ${CT_RES}

    OBS_ID=`grep '"Obs.*ID' ${JSON_FILE} | awk -F':' '{ print $2 }' | tr -d ' ,'`
    OBJ_NAME=`grep '"Source\ Name' ${JSON_FILE} | awk -F':' '{ print $2 }' | sed -e 's/\ *"//' -e 's/"\ *,$//'`
    CT=`grep -i '^Cooling_time' ${CT_RES} | awk '{ print $2 }'`

    printf "\n" | tee -a ${CT_RES}
    printf "# OBS_ID,OBJ_NAME,CT_gyr\n" | tee -a ${CT_RES}
    printf "# $OBS_ID,$OBJ_NAME,$CT\n" | tee -a ${CT_RES}
fi

exit 0