#!/bin/sh # # This script is used to make a bare '_INFO.json' file # placed under directory 'repro/', # thus scripts 'ciao_calc_ct.sh' and 'ciao_calc_csb.sh' # can get required information from this file. # # Run this script in directory 'repro/'. # # Weitian LI # 2014/06/24 # # ChangeLog: # v1.1, 2014/12/05, Weitian LI # regex '\s+' not supported by old grep version, change to use '[[:space:]]+' # ## usage, help {{{ case "$1" in -[hH]*|--[hH]*) printf "usage:\n" printf " `basename $0` evtdir= spcdir= imgdir= massdir= json=\n" printf "NOTE: run this script in dir 'repro/'\n" exit 1 ;; esac ## usage, help }}} ## default parameters {{{ # basedir: . (run this script under basedir) BASEDIR=`pwd -P` # ## directory structure of wjy's data # default evtdir relative to 'basedir' DFT_EVTDIR="../evt2/evt" # default spcdir relative to 'basedir' DFT_SPCDIR="../evt2/spc/profile" # default imgdir relative to 'basedir' DFT_IMGDIR="../evt2/img" # default massdir relative to 'basedir' DFT_MASSDIR="../evt2/mass" ## }}} ## functions {{{ # process commandline arguments # cmdline arg format: `KEY=VALUE' getopt_keyval() { until [ -z "$1" ] do key=${1%%=*} # extract key val=${1#*=} # extract value keyval="${key}=\"${val}\"" echo "## getopt: eval '${keyval}'" eval ${keyval} shift # shift, process next one done } ## functions }}} ## parameters {{{ # process cmdline args using `getopt_keyval' getopt_keyval "$@" # evt dir if [ ! -z "${evtdir}" ] && [ -d "${BASEDIR}/${evtdir}" ]; then EVT_DIR=`( cd ${BASEDIR}/${evtdir} && pwd -P )` elif [ -d "${BASEDIR}/${DFT_EVTDIR}" ]; then EVT_DIR=`( cd ${BASEDIR}/${DFT_EVTDIR} && pwd -P )` else read -p "> evt dir (relative to basedir): " EVT_DIR if [ ! -d "${BASEDIR}/${EVT_DIR}" ]; then printf "ERROR: given \`${EVT_DIR}' invalid\n" exit 20 else EVT_DIR="${BASEDIR}/${EVT_DIR}" fi fi printf "## use evtdir: \`${EVT_DIR}'\n" # spc dir if [ ! -z "${spcdir}" ] && [ -d "${BASEDIR}/${spcdir}" ]; then SPC_DIR=`( cd ${BASEDIR}/${spcdir} && pwd -P )` elif [ -d "${BASEDIR}/${DFT_SPCDIR}" ]; then SPC_DIR=`( cd ${BASEDIR}/${DFT_SPCDIR} && pwd -P )` else read -p "> spc dir (relative to basedir): " SPC_DIR if [ ! -d "${BASEDIR}/${SPC_DIR}" ]; then printf "ERROR: given \`${SPC_DIR}' invalid\n" exit 21 else SPC_DIR="${BASEDIR}/${SPC_DIR}" fi fi printf "## use spcdir: \`${SPC_DIR}'\n" # img dir if [ ! -z "${imgdir}" ] && [ -d "${BASEDIR}/${imgdir}" ]; then IMG_DIR=`( cd ${BASEDIR}/${imgdir} && pwd -P )` elif [ -d "${BASEDIR}/${DFT_IMGDIR}" ]; then IMG_DIR=`( cd ${BASEDIR}/${DFT_IMGDIR} && pwd -P )` else read -p "> img dir (relative to basedir): " IMG_DIR if [ ! -d "${BASEDIR}/${IMG_DIR}" ]; then printf "ERROR: given \`${IMG_DIR}' invalid\n" exit 22 else IMG_DIR="${BASEDIR}/${IMG_DIR}" fi fi printf "## use imgdir: \`${IMG_DIR}'\n" # mass dir if [ ! -z "${massdir}" ] && [ -d "${BASEDIR}/${massdir}" ]; then MASS_DIR=`( cd ${BASEDIR}/${massdir} && pwd -P )` elif [ -d "${BASEDIR}/${DFT_MASSDIR}" ]; then MASS_DIR=`( cd ${BASEDIR}/${DFT_MASSDIR} && pwd -P )` else read -p "> mass dir (relative to basedir): " MASS_DIR if [ ! -d "${BASEDIR}/${MASS_DIR}" ]; then printf "ERROR: given \`${MASS_DIR}' invalid\n" exit 22 else MASS_DIR="${BASEDIR}/${MASS_DIR}" fi fi printf "## use massdir: \`${MASS_DIR}'\n" ## }}} # set files EVT2_CLEAN=`readlink -f ${EVT_DIR}/evt2*_clean*.fits | head -n 1` MASS_SBP_CFG=`readlink -f ${MASS_DIR}/source.cfg` MASS_RES=`readlink -f ${MASS_DIR}/final_result*.txt` SPC_CFG=`readlink -f ${IMG_DIR}/spc_fit.cfg` # get needed data punlearn dmkeypar OBSID=`dmkeypar "${EVT2_CLEAN}" OBS_ID echo=yes` NAME=`dmkeypar "${EVT2_CLEAN}" OBJECT echo=yes` Z=`grep -E '^z[[:space:]]+' ${MASS_SBP_CFG} | awk '{ print $2 }'` NH=`grep -E '^nh[[:space:]]+' ${SPC_CFG} | awk '{ print $2 }'` R500=`grep -E '^r500=' ${MASS_RES} | awk '{ print $2 }'` # generate info json file if [ ! -z "${json}" ]; then JSON_FILE="${json}" else JSON_FILE="oi${OBSID}_INFO.json" fi printf "## info json_filename: \`${JSON_FILE}'\n" cat > ${JSON_FILE} << _EOF_ { "Obs. ID": ${OBSID}, "Source Name": "${NAME}", "nH (10^22 cm^-2)": ${NH}, "redshift": ${Z}, "R500 (kpc)": ${R500}, "Comment": "Bare info json file created by `basename $0`" }, _EOF_