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* clusters: dump & load catalog with commentsAaron LI2018-01-021-5/+5
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* clusters: rework the reuse of previously dumped cluster catalogAaron LI2018-01-023-36/+65
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* configs/checkers: add _check_file_existence() and some cleanupsAaron LI2018-01-021-14/+49
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* clusters: merge _save_halos_catalog() and _dump_halos_data()Aaron LI2018-01-021-28/+26
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* clusters: change "catalog" from DataFrame to a list of dictAaron LI2018-01-021-71/+79
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* clusters/formation: return {} instead of None if no event foundAaron LI2018-01-021-4/+4
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* Minor updates and cleanupsAaron LI2018-01-023-27/+26
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* clusters/psformalism: sample_z_m() return tuple of lists instead of dataframeAaron LI2018-01-022-27/+13
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* clusters/formation: add "mergers()" to extract all the merger eventsAaron LI2018-01-011-0/+36
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* Improve descriptions and minor cleanupsAaron LI2018-01-013-17/+14
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* clusters/mergertree: simplify recent_major_merger and maximum_mergerAaron LI2018-01-011-47/+23
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* clusters/mergertree: add param mtree to maximum_merger and recent_major_mergerAaron LI2018-01-012-7/+8
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* clusters/mergertree: simplify and improve show_mtree()Aaron LI2018-01-011-28/+22
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* clusters/halo: impose the maximum acceleration timescaleAaron LI2018-01-011-3/+9
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* clusters/mergertree: implement itermain(), lmain, imain(idx)Aaron LI2018-01-011-0/+45
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* clusters/mergertree: Use utils.io for pickle dump and loadAaron LI2018-01-011-10/+4
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* clusters/mergertree: import matplotlib only when usedAaron LI2018-01-011-4/+6
| | | | In this way to avoid dependency on matplotlib. Also add print messages.
* clusters/mergertree: improve print formats for "show_mtree()"Aaron LI2018-01-011-4/+7
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* Minor changesAaron LI2018-01-013-24/+24
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* clusters/formation: Move parameter "ratio_major" to recent_major_merger()Aaron LI2018-01-012-32/+19
| | | | | | * Simplify "max_merger" property to not check whether it is a major merger. * Rename "max_merger" to "maximum_merger" * Rename "simulate_mergertree()" to "simulate_mtree()"
* clusters/halo: Change option "tau_merger" to "time_traceback"Aaron LI2018-01-012-9/+9
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* clusters/halo: adjust radio halo size estimationAaron LI2018-01-011-3/+3
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* clusters/halo: improve turbulence velocity dispersion calculationAaron LI2018-01-011-9/+9
| | | | | | | Use the merged total mass instead of the main cluster mass only as the denominator to determine the turbulence velocity dispersion, which reduces the scatter and thus the acceleration results will be less sensitive to the (mostly unknown) merging turbulence properties.
* Bump version to 0.6.4v0.6.4Aaron LI2017-12-311-2/+2
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* Update README.rstAaron LI2017-12-311-15/+14
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* clusters/halo: Add back "mach_turbulence" attributeAaron LI2017-12-312-4/+15
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* clusters/halo: Rework the turbulence acceleration timescale calculationAaron LI2017-12-312-49/+53
| | | | | | | | The new method adopted to determine the turbulence acceleration timescale follows [miniati2015] and [pinzke2017], in which the merger-induced turbulence cascades into small scales (and thus accelerate electrons) through the TTD (transit-time damping) mechanism by scattering mainly with the relativistic particles (cosmic-ray protons and electrons).
* clusters/halo: calc turbulence velocity dispersion based on mergerAaron LI2017-12-312-9/+41
| | | | | Also update the description of option "extragalactic/halos/eta_turb" and change its default value to 0.1
* clusters/halo/helper: Add fmass_nfw() to calc NFW mass profileAaron LI2017-12-311-0/+30
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* Minor cleanupsAaron LI2017-12-312-13/+24
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* Minor cleanupsAaron LI2017-12-302-6/+6
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* clusters/halo: support to drop out the most powerful halosAaron LI2017-12-302-0/+29
| | | | | The new option "extragalactic/clusters/halo_dropout" is added to specify how many halos to be dropped out.
* clusters/halo: Add virial_speed() helper functionAaron LI2017-12-301-2/+13
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* clusters/halo: Estimate turbulence acceleration w.r.t. injection scaleAaron LI2017-12-303-16/+39
| | | | The turbulence injection scale ~ halo size
* cluster/halo: Estimate halo radius ~ 0.33*R_vir (main cluster)Aaron LI2017-12-303-10/+20
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* clusters/halo: Tune the maximum acceleration timescale to 10 GyrAaron LI2017-11-161-6/+17
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* logging: report line numbers to help debugAaron LI2017-11-161-1/+1
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* README: cleanupsAaron LI2017-11-161-11/+3
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* setup.py: improve trove classifiersAaron LI2017-11-161-2/+6
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* clusters/halo: improve advection calculationAaron LI2017-11-161-10/+10
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* Deprecate np.int, np.floatAaron LI2017-11-034-9/+9
| | | | See: https://github.com/numpy/numpy/pull/6103
* fg21sim: Bump version to 0.6.3v0.6.3Aaron LI2017-10-302-6/+6
| | | | | * Update the __init__ description a bit * Add the missing parameter change for ``f_acc``
* clusters/halo: Tune default parametersAaron LI2017-10-301-4/+4
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* products.py: Add a note about updating against with sky.pyAaron LI2017-10-291-1/+3
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* Update logging messagesAaron LI2017-10-292-3/+5
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* clusters/configs: Update f_acc default to 1.0; also update descriptionsAaron LI2017-10-262-2/+8
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* utils/grid.py: Disable Numba JIT for make_ellipse() & make_grid_ellipse()Aaron LI2017-10-261-8/+0
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* clusters/halo: Calc turbulence injection scale w.r.t. sub-cluster radiusAaron LI2017-10-261-6/+8
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* configs: update option "gamma_min" default to 1 (old: 10)Aaron LI2017-10-251-1/+3
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* clusters/solver: Update buffer_np description and handlingAaron LI2017-10-252-4/+11
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