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author | Aaron LI <aly@aaronly.me> | 2018-02-06 16:46:52 +0800 |
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committer | Aaron LI <aly@aaronly.me> | 2018-02-06 16:46:52 +0800 |
commit | 9621d66105248b3f460b54e64f2b98e60b1fa839 (patch) | |
tree | e4137eeffb1bfde8157d865aaa0029fccd368b67 | |
parent | 297fb2fd4678d39f20684013108b4545ea84a1ea (diff) | |
download | atoolbox-9621d66105248b3f460b54e64f2b98e60b1fa839.tar.bz2 |
astro/wsclean.py: allow use 'WSCLEAN_BIN' to specify path to the binary
-rwxr-xr-x | astro/oskar/wsclean.py | 10 |
1 files changed, 8 insertions, 2 deletions
diff --git a/astro/oskar/wsclean.py b/astro/oskar/wsclean.py index 9924d3b..05953fa 100755 --- a/astro/oskar/wsclean.py +++ b/astro/oskar/wsclean.py @@ -19,6 +19,10 @@ import time import tempfile +WSCLEAN_BIN = os.environ.get("WSCLEAN_BIN", "wsclean") +print("WSClean binary: %s" % WSCLEAN_BIN) + + def printlog(msg, logfile=None, **kwargs): if logfile: files = [sys.stdout, logfile] @@ -42,7 +46,7 @@ def wsclean(args, dryrun=False, logfile=None): """ tmpdir = tempfile.TemporaryDirectory() cmd = [ - "wsclean", "-temp-dir", tmpdir.name, + WSCLEAN_BIN, "-temp-dir", tmpdir.name, ] + [str(arg) for arg in args] # NOTE: Convert all arguments to strings printlog("CWD: %s" % os.getcwd()) printlog("CMD: %s" % " ".join(cmd), logfile=logfile) @@ -72,7 +76,9 @@ def wsclean(args, dryrun=False, logfile=None): def main(): parser = argparse.ArgumentParser( - description="Run WSClean with more handy arguments") + description="Run WSClean with more handy arguments", + epilog="NOTE: use env variable 'WSCLEAN_BIN' to specify the path " + + "to the WSClean binary") parser.add_argument("-a", "--args", dest="args", help="additional arguments for WSClean, " + "in a quoted string separated by space, e.g.," + |