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authorAaron LI <aly@aaronly.me>2017-11-24 13:29:46 +0800
committerAaron LI <aly@aaronly.me>2017-11-24 13:29:46 +0800
commite0606e038299a2c9262bfc45085d454c5a473079 (patch)
treec7f3b089f63e141852ac99cf569530bd23a2101d /astro/oskar
parent13163368bfaeaa7e2087d64a5b581d314c47018d (diff)
downloadatoolbox-e0606e038299a2c9262bfc45085d454c5a473079.tar.bz2
astro/wsclean.py: Capture wsclean output and save into a log file
Diffstat (limited to 'astro/oskar')
-rwxr-xr-xastro/oskar/wsclean.py40
1 files changed, 33 insertions, 7 deletions
diff --git a/astro/oskar/wsclean.py b/astro/oskar/wsclean.py
index f331e32..76e9229 100755
--- a/astro/oskar/wsclean.py
+++ b/astro/oskar/wsclean.py
@@ -11,26 +11,46 @@
import os
+import sys
import re
import argparse
import subprocess
import time
-def wsclean(args, dryrun=False):
+def printlog(msg, logfile=None, **kwargs):
+ if logfile:
+ files = [sys.stdout, logfile]
+ else:
+ files = [sys.stdout]
+ for f in files:
+ print(msg, file=f, **kwargs)
+
+
+def wsclean(args, dryrun=False, logfile=None):
# NOTE: Convert all arguments to strings
cmd = ["wsclean"] + [str(arg) for arg in args]
- print("CMD: %s" % " ".join(cmd))
+ printlog("CMD: %s" % " ".join(cmd), logfile=logfile)
if dryrun:
print(">>> DRY RUN MODE <<<")
return
t1 = time.perf_counter()
- subprocess.check_call(cmd)
+ with subprocess.Popen(cmd, stdout=subprocess.PIPE,
+ stderr=subprocess.STDOUT,
+ universal_newlines=True) as proc:
+ for line in proc.stdout:
+ printlog(line.strip(), logfile=logfile)
+ retcode = proc.wait()
+ if retcode:
+ raise subprocess.CalledProcessError(retcode, cmd)
t2 = time.perf_counter()
- print("-----------------------------------------------------------")
- print("WSClean Elapsed time: %.1f [min]" % ((t2-t1)/60))
- print("-----------------------------------------------------------")
+ printlog("-----------------------------------------------------------",
+ logfile=logfile)
+ printlog("WSClean Elapsed time: %.1f [min]" % ((t2-t1)/60),
+ logfile=logfile)
+ printlog("-----------------------------------------------------------",
+ logfile=logfile)
def main():
@@ -174,7 +194,13 @@ def main():
cmdargs += ["-name", nameprefix]
cmdargs += args.ms
- wsclean(cmdargs, dryrun=args.dryrun)
+ if args.dryrun:
+ logfile = None
+ else:
+ logfilename = nameprefix + "-wsclean.log"
+ logfile = open(logfilename, "w")
+ logfile.write(" ".join(sys.argv) + "\n")
+ wsclean(cmdargs, dryrun=args.dryrun, logfile=logfile)
if args.dirty and not args.dryrun:
# Remove the output "-image" since it is identical to "-dirty"