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-rwxr-xr-xastro/oskar/run_oskar.py26
1 files changed, 23 insertions, 3 deletions
diff --git a/astro/oskar/run_oskar.py b/astro/oskar/run_oskar.py
index 79c2518..145a083 100755
--- a/astro/oskar/run_oskar.py
+++ b/astro/oskar/run_oskar.py
@@ -18,6 +18,18 @@ import shutil
from time import time
+def file_len(fname):
+ """
+ Get the number of lines of a text file.
+
+ Credit: https://stackoverflow.com/q/845058/4856091
+ """
+ with open(fname) as f:
+ for i, l in enumerate(f):
+ pass
+ return i+1
+
+
def run_oskar(configfile, model, freq, vis_ms, vis_oskar=None,
telescope=None, chunksize=None, double_precision=None,
use_gpus=None, gpu_ids=None, num_devices=None,
@@ -75,8 +87,11 @@ def main():
help="filename pattern of the configuration files " +
"updated for OSKAR usage " +
"(default: %s)" % default_fconfig)
- parser.add_argument("-S", "--chunk-size", dest="chunksize", type=float,
- help="overwrite the chunk size in config file")
+ parser.add_argument("-S", "--max-chunk", dest="chunk_max", type=float,
+ help="maximum allowed chunk size; if the input " +
+ "sky model has less sources than this maximum " +
+ "chunk size, then use the input source number " +
+ "as the simulation chunk size.")
parser.add_argument("--vis-oskar", dest="vis_oskar",
action="store_true",
help="also save visibility in OSKAR native format")
@@ -148,6 +163,11 @@ def main():
print("=============================================================")
print("[%d/%d] %s @ %.2f [MHz]" % (i+1, Nosm, skyfile, freq))
print("-------------------------------------------------------------")
+ Nsrc = file_len(skyfile)
+ print("Number of sources: ~{:,}".format(Nsrc))
+ chunksize = args.chunk_max
+ if chunksize and chunksize > Nsrc:
+ chunksize = Nsrc
basename = os.path.splitext(os.path.basename(skyfile))[0]
if args.vis_oskar:
vis_oskar = os.path.join(args.outdir, basename+".oskar")
@@ -159,7 +179,7 @@ def main():
print("Copied OSKAR configuration file as: %s" % configfile)
run_oskar(configfile=configfile, freq=freq,
model=skyfile, vis_ms=vis_ms, vis_oskar=vis_oskar,
- telescope=args.telescope, chunksize=args.chunksize,
+ telescope=args.telescope, chunksize=chunksize,
double_precision=double_precision,
use_gpus=use_gpus, gpu_ids=args.gpu_ids,
num_devices=args.num_devices, dryrun=args.dryrun)