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-rwxr-xr-xastro/oskar/fits2skymodel.py40
1 files changed, 22 insertions, 18 deletions
diff --git a/astro/oskar/fits2skymodel.py b/astro/oskar/fits2skymodel.py
index eefeb1c..c07c9de 100755
--- a/astro/oskar/fits2skymodel.py
+++ b/astro/oskar/fits2skymodel.py
@@ -50,8 +50,9 @@ class SkyModel:
Input image array; unit [K] (brightness temperature)
freq : float
Frequency of the input image slice; unit [MHz]
- pixsize : float
- Pixel size of the input image; unit [arcmin]
+ pixelsize : float
+ Pixel size of the input image;
+ Unit: [arcsec]
ra0, dec0 : float
The coordinate of the image center; unit [deg]
minvalue : float, optional
@@ -64,13 +65,13 @@ class SkyModel:
The WCS projection for the image; default "TAN"
TODO: support "SIN" etc.
"""
- def __init__(self, image, freq, pixsize, ra0, dec0,
+ def __init__(self, image, freq, pixelsize, ra0, dec0,
minvalue=1e-4, mask=None, projection="TAN"):
- self.image = image # K (brightness temperature)
- self.freq = freq # MHz
- self.pixsize = pixsize # arcmin
- self.ra0 = ra0 # deg
- self.dec0 = dec0 # deg
+ self.image = image # [K] (brightness temperature)
+ self.freq = freq # [MHz]
+ self.pixelsize = pixelsize # [arcsec]
+ self.ra0 = ra0 # [deg]
+ self.dec0 = dec0 # [deg]
self.minvalue = minvalue
self.mask = mask
self.projection = projection
@@ -82,7 +83,7 @@ class SkyModel:
WCS for the given image slice.
"""
shape = self.image.shape
- delta = self.pixsize / 60.0 # deg
+ delta = self.pixelsize / 3600.0 # [arcsec] -> [deg]
wcs_ = WCS(naxis=2)
wcs_.wcs.ctype = ["RA---"+self.projection, "DEC--"+self.projection]
wcs_.wcs.crval = np.array([self.ra0, self.dec0])
@@ -97,7 +98,7 @@ class SkyModel:
header["FREQ"] = (self.freq, "Frequency [MHz]")
header["RA0"] = (self.ra0, "Center R.A. [deg]")
header["DEC0"] = (self.dec0, "Center Dec. [deg]")
- header["PIXSIZE"] = (self.pixsize, "Pixel size [arcmin]")
+ header["PixSize"] = (self.pixelsize, "Pixel size [arcsec]")
return header
@property
@@ -107,7 +108,7 @@ class SkyModel:
http://www.iram.fr/IRAMFR/IS/IS2002/html_1/node187.html
"""
- pixarea = np.deg2rad(self.pixsize/60.0) ** 2 # [sr]
+ pixarea = np.deg2rad(self.pixelsize/3600.0) ** 2 # [sr]
kB = ac.k_B.si.value # Boltzmann constant [J/K]
c0 = ac.c.si.value # speed of light in vacuum [m/s]
freqHz = self.freq * 1e6 # [Hz]
@@ -164,7 +165,7 @@ class SkyModel:
nsources = sky.shape[0]
logger.info("Number of sources: %d" % nsources)
header = ("Frequency = %.3f [MHz]\n" % self.freq +
- "Pixel size = %.2f [arcmin]\n" % self.pixsize +
+ "Pixel size = %.2f [arcsec]\n" % self.pixelsize +
"RA0 = %.4f [deg]\n" % self.ra0 +
"Dec0 = %.4f [deg]\n" % self.dec0 +
"Number of sources = %d\n\n" % len(sky) +
@@ -219,9 +220,9 @@ def main():
parser.add_argument("-d", "--dec0", dest="dec0", type=float,
default=-27.0,
help="Dec. of the image center")
- parser.add_argument("-p", "--pix-size", dest="pixsize", type=float,
- help="image pixel size [arcmin]; " +
- "(default: obtain from the FITS header 'PIXSIZE')")
+ parser.add_argument("-p", "--pixel-size", dest="pixelsize", type=float,
+ help="image pixel size [arcsec]; " +
+ "(default: obtain from the FITS header 'PixSize')")
parser.add_argument("-f", "--freq", dest="freq", type=float,
help="frequency [MHz] the image measured; " +
"(default: obtain from the FITS header 'FREQ')")
@@ -263,9 +264,12 @@ def main():
header = f[0].header
logger.info("Read image slice: %s" % args.infile)
freq = args.freq if args.freq else header["FREQ"] # [MHz]
- pixsize = args.pixsize if args.pixsize else header["PIXSIZE"] # [arcmin]
+ if args.pixelsize:
+ pixelsize = args.pixelsize # [arcsec]
+ else:
+ pixelsize = header["PixSize"] # [arcsec]
logger.info("Frequency: %.2f [MHz]" % freq)
- logger.info("Pixel size: %.2f [arcmin]" % pixsize)
+ logger.info("Pixel size: %.2f [arcsec]" % pixelsize)
minvalue = 1e-4 # i.e., 0.1 [mK]
mask = None
if args.minvalue:
@@ -276,7 +280,7 @@ def main():
mask = fits.open(args.mask)[0].data.astype(np.bool)
logger.info("Minimum threshold: %g [K]" % minvalue)
skymodel = SkyModel(image=image, freq=freq, ra0=args.ra0, dec0=args.dec0,
- pixsize=pixsize, minvalue=minvalue, mask=mask)
+ pixelsize=pixelsize, minvalue=minvalue, mask=mask)
logger.info("Conversion [K] -> [Jy/pixel]: %g" % skymodel.factor_K2JyPixel)
skymodel.write_sky_model(outfile, clobber=args.clobber)
if args.osmfits: