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* astro/calc_psd.py: Improve plot style and minor cleanupsAaron LI2017-11-272-17/+20
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* astro/eor_window.py: default "e" to 3.0, describe --fov moreAaron LI2017-11-271-2/+4
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* astro/eor_window.py: simplify arguments, improve plot, more printsAaron LI2017-11-271-87/+134
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* astro/ps2d.py: Improve ticks style and use monospace fontAaron LI2017-11-261-2/+15
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* Add astro/eor_window.py: Calc total power within the defined EoR windowAaron LI2017-11-252-3/+289
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* astro/ps2d.py: Check outfile existence before calculationAaron LI2017-11-251-0/+3
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* astro/wsclean.py: Use randonly generated temporary directoryAaron LI2017-11-241-3/+17
| | | | | Therefore the conflict that running multiple WSClean's on the same MeasurementSet can be avoided.
* astro/ps2d.py: Support --center to crop out central spatial partAaron LI2017-11-241-0/+17
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* astro/ps2d.py: Update logging formatAaron LI2017-11-242-3/+5
| | | | Also close the logfile for astro/oskar/wsclean.py
* astro/ps2d.py: Use same colormap (scales) for error power spectrumAaron LI2017-11-241-0/+2
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* astro/ps2d.py: Remove frequency window width functionAaron LI2017-11-241-24/+5
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* Add astro/msutils.py: finished the "info" commandAaron LI2017-11-241-0/+352
| | | | Based on https://github.com/SpheMakh/msutils (GPLv2)
* astro/wsclean.py: Capture wsclean output and save into a log fileAaron LI2017-11-241-7/+33
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* astro/fits2skymodel.py: Fix OSM FITS save; Update headerAaron LI2017-11-231-8/+20
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* astro/fits2skymodel.py: support thresholding by a maximum valueAaron LI2017-11-231-30/+37
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* astro/make_lightcone.py: WARN that the result seems/is wrong!Aaron LI2017-11-221-0/+7
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* astro/fits2skymodel.py: Take absolute values (21 cm signal absorption)Aaron LI2017-11-221-1/+1
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* Minor improves to output/loggingAaron LI2017-11-222-3/+4
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* Add astro/21cm/21cmfast_lightcone.py: convert 21cmFAST lighttravel cubesAaron LI2017-11-221-0/+192
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* astro/calc_psd.py: Add argument --centerAaron LI2017-11-221-0/+15
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* astro/tile_slice.py: Workaround the scipy zoom warningAaron LI2017-11-221-1/+2
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* Improve logging formatAaron LI2017-11-223-4/+5
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* astro/wsclean.py: Add argument --circular-beamAaron LI2017-11-211-1/+7
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* astro/jybeam2k.py: Derive beam size using 'WSCNORMF' by defaultAaron LI2017-11-211-9/+45
| | | | | * Add argument --use-fitted-beam to force to use the fitted beam * Change argument --beam to --beam-size
* astro/jybeam2k.py: Add argument --beam to allow to specify beam sizeAaron LI2017-11-211-6/+13
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* astro/oskar: Add beamsize.py to summary beam sizes of multiple imagesAaron LI2017-11-211-0/+59
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* calc_psd.py & ps2d.py: Change --plot to --no-plotAaron LI2017-11-192-19/+12
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* xspec_instlines_mc.tcl: Append time stamp to output filesAaron LI2017-11-181-5/+6
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* xspec_instlines_mc.tcl: Freeze line norms before Monte CarloAaron LI2017-11-181-2/+2
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* Add xspec_instlines_mc.tcl to evaluate instrumental lines systematic effectsAaron LI2017-11-181-0/+281
| | | | See the script header for more explanations.
* astro/xmm: Add several previously developed scriptsAaron LI2017-11-167-0/+1019
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* jybeam2k.py & wsclean.py: Update descriptions/commentsAaron LI2017-11-152-10/+12
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* astro/calc_psd.py: default to logarithmic step of ratio 1.1Aaron LI2017-11-121-12/+14
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* astro/calc_psd.py: Add bunit to PSD and update ylabelAaron LI2017-11-121-3/+11
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* crosstalk_deprojection.py: v0.6.0, report spectral data changes; many fixesAaron LI2017-11-121-166/+195
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* crosstalk_deprojection.py: Clean up arguments; Add CONFIGS global variableAaron LI2017-11-121-57/+85
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* crosstalk_deprojection.py: More cleanupsAaron LI2017-11-121-242/+256
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* spectrum/crosstalk_deprojection.py: more cleanupsAaron LI2017-11-121-92/+104
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* 21cm: Fix Nside comment; minor updates about descriptionsAaron LI2017-11-062-4/+4
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* astro/ps2d.py: Add get_pixelsize(); and improve get_frequencies()Aaron LI2017-11-041-15/+36
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* Fix the wrong use of IQR (interquartile range)Aaron LI2017-11-042-9/+9
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* astro/ps2d.py: plot the errors aside the mean/median valuesAaron LI2017-11-041-12/+50
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* astro/ps2d.py: Improve window generation; add --window-width argumentAaron LI2017-11-041-16/+23
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* astro/ps2d.py: default to calculate median and 68% IQRAaron LI2017-11-041-5/+43
| | | | | * Add argument -m/--mean-std to calculate the original mean and std values * Add new header keyword "AvgType" to record this selection
* astro/ps2d.py: Add parameter description; remove unused pad_cube()Aaron LI2017-11-041-8/+17
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* astro/ps2d.py: use "jet" colormap and improve axis labelsAaron LI2017-11-041-3/+4
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* astro/calc_psd.py: default to calculate median and 68% IQRAaron LI2017-11-031-20/+89
| | | | | | | | * Add argument -m/--mean-std to switch to calculate the original mean and standard deviation * Add "save()" method to the PSD class * Significantly update the parameter descriptions * Save more information with the psd data to the saved TXT file
* Deprecate np.int, np.floatAaron LI2017-11-034-11/+9
| | | | See: https://github.com/numpy/numpy/pull/6103
* astro/calc_psd.py: Also plot the additional pixel-based frequency axisAaron LI2017-11-031-1/+20
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* astro/calc_psd.py: Support image pixel sizeAaron LI2017-11-031-1/+17
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