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#!/usr/bin/env python
import sys
import os
import exceptions
import re
grppha_comm="aa"
def extract_mos(regdes,table_name,temp_pi,bg_table_name,out_bg_name,rmf_name,arf_name,spec_bin_cmd,det='mos1'):
expr="'((X,Y) IN %s)'"%regdes
out_pi_name = "_a.pi"
if not re.search(".pi$",bg_table_name):
cmd="evselect"
cmd+=" table=%s withspectrumset=yes spectrumset=%s energycolumn=PI spectralbinsize=5 withspecranges=yes specchannelmin=0 specchannelmax=11999 expression=%s "%(bg_table_name,out_bg_name,expr)
print(cmd)
cmd+=">/dev/null"
print("extracting background...")
os.system(cmd)
else:
out_bg_name=bg_table_name
cmd="evselect"
cmd+=" table=%s withspectrumset=yes spectrumset=%s energycolumn=PI spectralbinsize=5 withspecranges=yes specchannelmin=0 specchannelmax=11999 expression=%s"%(table_name,out_pi_name,expr)
print(cmd)
cmd+=">/dev/null"
print("extracting spectrum...")
os.system(cmd)
try:
os.unlink(temp_pi)
except exceptions.OSError:
pass
cmd="grppha infile='%s' outfile='%s' comm='%s & chkey BACKFILE %s & chkey RESPFILE %s & chkey ANCRFILE %s & exit &'"%(out_pi_name,temp_pi,spec_bin_cmd,out_bg_name,rmf_name,arf_name)
# print cmd
cmd+=">/dev/null"
os.system(cmd)
def extract_pn(regdes,table_name,temp_pi,bg_table_name,out_bg_name,rmf_name,arf_name,spec_bin_cmd,det='mos1'):
expr="'((X,Y) IN %s)'"%regdes
out_pi_name = "_a.pi"
if not re.search(".pi$",bg_table_name):
cmd="evselect"
cmd+=" table=%s withspectrumset=yes spectrumset=%s energycolumn=PI spectralbinsize=5 withspecranges=yes specchannelmin=0 specchannelmax=20479 expression=%s "%(bg_table_name,out_bg_name,expr)
print(cmd)
cmd+=">/dev/null"
print("extracting background...")
os.system(cmd)
else:
out_bg_name=bg_table_name
cmd="evselect"
cmd+=" table=%s withspectrumset=yes spectrumset=%s energycolumn=PI spectralbinsize=5 withspecranges=yes specchannelmin=0 specchannelmax=20479 expression=%s"%(table_name,out_pi_name,expr)
print(cmd)
cmd+=">/dev/null"
print("extracting spectrum...")
os.system(cmd)
try:
os.unlink(temp_pi)
except exceptions.OSError:
pass
cmd="grppha infile='%s' outfile='%s' comm='%s & chkey BACKFILE %s & chkey RESPFILE %s & chkey ANCRFILE %s & exit &'"%(out_pi_name,temp_pi,spec_bin_cmd,out_bg_name,rmf_name,arf_name)
# print cmd
cmd+=">/dev/null"
os.system(cmd)
def make_fit_script(fit_script_template,pi_list,fit_script):
fit_script.write("set ff [open %s w]\n"%temp_result_name)
# print "fit_scriptfit_script"
for i in fit_script_template:
if re.search("^#PARA",i):
para=re.split("\ +",i)
fit_script.write("tclout para %s\n"%para[2])
fit_script.write('puts $ff "$xspec_tclout %s"\n'%para[1])
elif re.search("^#STAT",i):
fit_script.write("tclout stat\n")
fit_script.write('puts $ff "$xspec_tclout statistic"\n')
fit_script.write("tclout dof\n")
fit_script.write('puts $ff "$xspec_tclout dof"\n')
elif re.search("^#GRPPHA",i):
grppha_comm=str.strip(re.sub("#GRPPHA","",i))
return grppha_comm
elif re.search("^#MODEL",i):
fit_script.write(str.strip(re.sub("#MODEL","",i))+"\n")
elif re.search("^#DATA",i):
for j in range(0,len(pi_list)):
fit_script.write("data %d:%d %s\n"%(j+1,j+1,pi_list[j]))
elif re.search("^#IGNORE",i):
for j in range(0,len(pi_list)):
fit_script.write("ignore %d:%s\n"%(j+1,str.strip(re.sub("#IGNORE","",i))))
else:
fit_script.write(i)
fit_script.write("tclexit\n")
# print "fdsf"
def parse_result(result_file):
result=""
for i in result_file:
str.strip(i)
sl=re.split("\ +",i)
if re.search('statistic',i):
result+=sl[0].strip()
result+=" "
elif re.search('dof',i):
result+=sl[0].strip()
result+=" "
else:
result+=sl[0].strip()
result+=" "
result+=sl[6].strip()
result+=" "
return result
temp_mos1_pi="_mos1.pi"
temp_mos2_pi="_mos2.pi"
temp_pn_pi="_pn.pi"
temp_mos1_bg="_mos1.bg"
temp_mos2_bg="_mos2.bg"
temp_pn_bg="_pn.bg"
temp_fit_script="_a.tcl"
temp_result_name="_a.dat"
def main(argv):
if len(argv)!=15:
print("Usage:%s <sample list> <mos1.evt> <mos2.evt> <pn.evt> <mos1.bkg> <mos2.bkg> <pn.bkg> <output file> <mos1.arf> <mos2.arf> <pn.arf> <mos1.rmf> <mos2.rmf> <pn.rmf> <fit script>"%(sys.argv[0]))
sys.exit()
sample_list_name=argv[0]
mos1_name=argv[1]
mos2_name=argv[2]
pn_name=argv[3]
mos1_bkg=argv[4]
mos2_bkg=argv[5]
pn_bkg=argv[6]
output_name=argv[7]
mos1_arf=argv[8]
mos2_arf=argv[9]
pn_arf=argv[10]
mos1_rmf=argv[11]
mos2_rmf=argv[12]
pn_rmf=argv[13]
fit_script_template=argv[14]
# print fit_script_template
n=1
fit_script=open(temp_fit_script,'w');
grppha_comm=make_fit_script(open(fit_script_template),[temp_mos1_pi,temp_mos2_pi,temp_pn_pi],fit_script)
#fit_script.write("tclexit")
fit_script.write("tclexit\n")
fit_script.close()
# print grppha_comm
# sys.exit()
outfile=open(output_name,'w')
for i in open(sample_list_name):
regdesc=str.strip(i)
if not re.search('^#NULL',regdesc):
extract_mos(regdesc,mos1_name,temp_mos1_pi,mos1_bkg,temp_mos1_bg,mos1_rmf,mos1_arf,grppha_comm)
extract_mos(regdesc,mos2_name,temp_mos2_pi,mos2_bkg,temp_mos2_bg,mos2_rmf,mos2_arf,grppha_comm)
extract_pn(regdesc,pn_name,temp_pn_pi,pn_bkg,temp_pn_bg,pn_rmf,pn_arf,grppha_comm)
print("fitting...")
os.system("xspec %s >/dev/null"%temp_fit_script)
result=parse_result(open(temp_result_name))
outfile.write("%d %s %s"%(n,result,'\n'))
print("%d %s"%(n,result))
else:
outfile.write("\n")
print("%d"%(n))
n+=1
outfile.flush()
if __name__=='__main__':
main(sys.argv[1:])
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