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authorAaron LI <aaronly.me@outlook.com>2016-07-11 22:48:03 +0800
committerAaron LI <aaronly.me@outlook.com>2016-07-11 22:48:03 +0800
commita0df5f38b626ea5a063438220ee7523dee7d3ef6 (patch)
tree7ae9f4a7f2daeae397a5ed5d94f71f5637c63383 /calc_mass_potential.py
parent9f6a62b80f49fd492383521bf616c708b5be10d9 (diff)
downloadcexcess-a0df5f38b626ea5a063438220ee7523dee7d3ef6.tar.bz2
calc_mass_potential.py: Use a default config to allow a minimal user config
Diffstat (limited to 'calc_mass_potential.py')
-rwxr-xr-xcalc_mass_potential.py57
1 files changed, 30 insertions, 27 deletions
diff --git a/calc_mass_potential.py b/calc_mass_potential.py
index 3254648..8cfe24e 100755
--- a/calc_mass_potential.py
+++ b/calc_mass_potential.py
@@ -2,9 +2,11 @@
#
# Aaron LI
# Created: 2016-06-24
-# Updated: 2016-07-10
+# Updated: 2016-07-11
#
# Change logs:
+# 2016-07-11:
+# * Use a default config to allow a minimal user config
# 2016-07-10:
# * Allow disable the calculation of potential profile
# * Use class 'SmoothSpline' from module 'spline.py'
@@ -111,12 +113,29 @@ References:
[1] Ettori et al., 2013, Space Science Review, 177, 119-154
[2] Walker et al., 2012, MNRAS, 422, 3503
[3] Tremaine & Binney, Galactic Dynamics, 2nd edition, 2008
+"""
-Sample configuration file:
-------------------------------------------------------------
+import argparse
+
+import numpy as np
+import astropy.units as au
+import astropy.constants as ac
+import scipy.integrate as integrate
+from scipy.misc import derivative
+from configobj import ConfigObj
+import matplotlib.pyplot as plt
+from matplotlib.backends.backend_agg import FigureCanvasAgg as FigureCanvas
+from matplotlib.figure import Figure
+
+from astro_params import AstroParams, ChandraPixel
+from projection import Projection
+from spline import SmoothSpline
+
+plt.style.use("ggplot")
+
+config_default = """
## Configuration for `calc_mass_potential.py`
-## Date: 2016-06-28
# electron density profile
ne_profile = ne_profile.txt
@@ -146,27 +165,8 @@ rho_total_profile_image = rho_total_profile.png
# NOTE: to disable potential calculation, do not specified the output files
potential_profile = potential_profile.txt
potential_profile_image = potential_profile.png
-------------------------------------------------------------
"""
-import argparse
-
-import numpy as np
-import astropy.units as au
-import astropy.constants as ac
-import scipy.integrate as integrate
-from scipy.misc import derivative
-from configobj import ConfigObj
-import matplotlib.pyplot as plt
-from matplotlib.backends.backend_agg import FigureCanvasAgg as FigureCanvas
-from matplotlib.figure import Figure
-
-from astro_params import AstroParams, ChandraPixel
-from projection import Projection
-from spline import SmoothSpline
-
-plt.style.use("ggplot")
-
class DensityProfile:
"""
@@ -603,11 +603,14 @@ class DensityProfile:
def main():
parser = argparse.ArgumentParser(
description="Calculate the mass and potential profiles")
- parser.add_argument("config", nargs="?", default="mass_potential.conf",
- help="config for mass and potential profiles " +
- "calculation (default: mass_potential.conf)")
+ parser.add_argument("config", nargs="?",
+ help="additional config")
args = parser.parse_args()
- config = ConfigObj(args.config)
+
+ config = ConfigObj(config_default.splitlines())
+ if args.config != "":
+ config_user = ConfigObj(args.config)
+ config.merge(config_user)
ne_profile = np.loadtxt(config["ne_profile"])
cf_profile = np.loadtxt(config["cf_profile"])