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Diffstat (limited to 'build_sample.sh')
| -rwxr-xr-x | build_sample.sh | 128 |
1 files changed, 128 insertions, 0 deletions
diff --git a/build_sample.sh b/build_sample.sh new file mode 100755 index 0000000..08fb76c --- /dev/null +++ b/build_sample.sh @@ -0,0 +1,128 @@ +#!/bin/sh +# +# Build and/or update the sample of studying central X-ray brightness +# excess, by only copying/updating the required products from our complete +# mass sample. +# +# Aaron LI +# Created: 2016-03-02 +# Updated: 2016-04-15 +# +# ChangeLog: +# 2016-04-15: +# * Add support for zzh's sample +# * Convert "_" to "-" in NAME +# + +analyze_path() { + # extract `obs_id' and `source name' from path + # + # Weitian LI <liweitianux@gmail.com> + # 2013/02/04 + # + # input: + # path that include `oi' and `source name' + # e.g.: + # + # output: + # + + echo "$@" | awk ' + # main part + { + if (NF==1) { + ## oi & name + input=($1 "/") + if (input ~ /_oi/) { + ## PATTERN: .../$name_oi$oi/... + idx_oi = match(input, /oi[0-9]+/) + 2; # "2" skip the "oi" + len_oi = RLENGTH - 2; + oi = substr(input, idx_oi, len_oi); + idx_name = match(input, /\/[a-zA-Z0-9.+-]+_oi/) + 1; + len_name = RLENGTH - 4; + name = substr(input, idx_name, len_name); + owner = "lwt"; + } + else { + ## PATTERN: .../$name/$oi/... + idx_oi = match(input, /\/[0-9]+\//) + 1; + len_oi = RLENGTH - 2; + oi = substr(input, idx_oi, len_oi); + idx_name1 = match(input, /\/[a-zA-Z0-9_.+-]+\/[0-9]+\//); + len_name1 = RLENGTH; + name1 = substr(input, idx_name1, len_name1); + idx_name = match(name1, /\/[a-zA-Z0-9_.+-]+\//) + 1; + len_name = RLENGTH - 2; + name = substr(name1, idx_name, len_name); + owner = "zzh"; + } + ## output + printf("input: %s\n", input) + printf("oi: %s\nname: %s\nowner: %s\n", oi, name, owner) + } + else { + printf("*** WARNING: invalid input: %s\n", $0) + } + } + # END { } + ' +} + + +if [ $# -lt 2 ]; then + echo "Usage:" + echo " `basename $0` <dest_root_dir> <repro_dir_list>" + echo " `basename $0` <dest_root_dir> <repro_dir1> ..." + exit 1 +fi + +DEST_ROOT="$1" +[ ! -d "${DEST_ROOT}" ] && mkdir -v "${DEST_ROOT}" + +# repro dir's +if [ -f "$2" ]; then + REPRO_LIST="$2" +elif [ -d "$2" ]; then + REPRO_LIST="_tmp_repro_$$.list" + [ -f "${REPRO_LIST}" ] && mv -f "${REPRO_LIST}" "${REPRO_LIST}_bak" + while [ ! -z "$2" ]; do + echo "$2" >> "${REPRO_LIST}" + shift + done +else + echo "ERROR: invalid arguments: $2" + exit 2 +fi + +INIT_DIR=`pwd -P` +cat "${REPRO_LIST}" | while read repro_dir; do + OI=`analyze_path "${repro_dir}" | grep '^oi:' | awk '{ print $2 }'` + NAME=`analyze_path "${repro_dir}" | grep '^name:' | awk '{ print $2 }'` + OWNER=`analyze_path "${repro_dir}" | grep '^owner:' | awk '{ print $2 }'` + # avoid "_" in name + NAME=`echo "${NAME}" | tr '_' '-'` + echo "********* ${NAME}_oi${OI} *********" + # create directories + DEST="${DEST_ROOT}/${NAME}_oi${OI}" + #[ ! -d "${DEST}/repro" ] && mkdir -pv ${DEST}/repro + [ ! -d "${DEST}/repro" ] && continue # Only update sample + cd "${DEST}/repro" + # simply copy the whole sub-directories + cp -av ${repro_dir}/acisf*.fits . + cp -av ${repro_dir}/acisf*.lis ${repro_dir}/pcadf*.fits . + cp -av ${repro_dir}/evt ${repro_dir}/bkg ${repro_dir}/img . + cp -av ${repro_dir}/*_INFO.json . + if [ "${OWNER}" = "zzh" ]; then + cp -av ${repro_dir}/spc/profile/rspec.reg ./img/ + cp -av ${repro_dir}/../evt2/spc/profile/rspec.reg ./img/rspec2.reg + cp -av ${repro_dir}/../evt2/img/sbprofile.reg ./img/sbprofile2.reg + cd ./img + [ ! -f "rspec.reg" ] && ln -sv rspec2.reg rspec.reg + [ ! -f "sbprofile.reg" ] && ln -sv sbprofile2.reg sbprofile.reg + fi + # apply clean up + find . \( -iname '*_bak' -o -iname '_tmp*' \) -delete + find . -type l -iname '*.dat' -delete + cd "${INIT_DIR}" +done + |