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#!/usr/bin/env python3
#
# Copyright (c) 2016 Aaron LI
# MIT license
#
# Extract R500 from the '*_INFO.json' file, and center coordinate from
# existing "sbprofile.reg", and then make the circle regions w.r.t R500
# in order to visualize the FoV coverage of the observations.
#
# Created: 2016-04-15
#
# Change log:
# 2016-05-04:
# * Split `get_r500()` function to a separate module `info`
# * Fix a wrong variable
# * PEP8 fixes
# 2016-04-28:
# * Add functions "get_r500()" and "get_center()" for code reuse
# 2016-04-16:
# * Fix R500 unit (convert from kpc to Chandra ACIS pixel)
#
import glob
import re
import argparse
from info import get_r500
def get_center(regfile):
"""
Get the center coordinate from the given region file
"""
regions = open(regfile).readlines()
regions = list(filter(lambda x: re.match(r"^(circle|annulus|pie).*",
x, re.I),
regions))
xc, yc = map(float, re.split(r"[(,)]", regions[0])[1:3])
return (xc, yc)
def frange(x, y, step):
while x < y:
yield x
x += step
def main():
parser = argparse.ArgumentParser(description="Make R500 circle regions")
parser.add_argument("-c", "--core", dest="core", action="store_true",
help="only consider core: (0.05, 0.1, 0.2, 0.3)R500")
parser.add_argument("-j", "--json", dest="json", required=False,
help="the *_INFO.json file " +
"(default: find ../*_INFO.json)")
parser.add_argument("-i", "--regin", dest="regin",
required=False, default="sbprofile.reg",
help="region from which to extract the center " +
"coordinate (default: sbprofile.reg)")
parser.add_argument("-o", "--regout", dest="regout",
required=False, default="r500.reg",
help="output region filename (default: r500.reg)")
args = parser.parse_args()
# default "*_INFO.json"
info_json = glob.glob("../*_INFO.json")[0]
if args.json:
info_json = args.json
r500 = get_r500(info_json)
r500_kpc = r500["r500_kpc"]
r500_pix = r500["r500_pix"]
print("R500: %.2f (kpc), %.2f (pixel)" % (r500_kpc, r500_pix))
# get center coordinate
xc, yc = get_center(args.regin)
# make r500 regions
region_fmt = "circle(%s,%s,{0:.7f}) " % (xc, yc) + \
"# text={{{1:.2f} R500 = {2:.1f} pix}}"
r500_regions = [
'# Region file format: DS9 version 4.1',
'global color=white width=1 font="helvetica 10 normal roman"',
'physical',
]
if args.core:
# only consider core regions
r500_regions.extend([region_fmt.format(r500_pix*ratio, ratio,
r500_pix*ratio)
for ratio in (0.05, 0.1, 0.2, 0.3)])
else:
r500_regions.extend([region_fmt.format(r500_pix*ratio, ratio,
r500_pix*ratio)
for ratio in frange(0.1, 1.0, 0.1)])
with open(args.regout, "w") as outfile:
outfile.write("\n".join(r500_regions) + "\n")
if __name__ == "__main__":
main()
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