Remove scripts/ciao_blanksky.sh (replaced by make_blanksky.py)

1 files changed, 0 insertions, 269 deletions

diff --git a/scripts/ciao_blanksky.sh b/scripts/ciao_blanksky.sh
deleted file mode 100755
index acd821e..0000000
--- a/scripts/ciao_blanksky.sh
+++ /dev/null
@@ -1,269 +0,0 @@
-#!/bin/sh
-#
-unalias -a
-export LC_COLLATE=C
-###########################################################
-## process `blanksky' bkg files for spectra analysis     ##
-## http://cxc.harvard.edu/ciao/threads/acisbackground/   ##
-##                                                       ##
-## for extracting the spectrum of the background         ##
-## for determining the background components             ##
-##                                                       ##
-## inputs: `evt2_clean', `asol files'                    ##
-## output: `blanksky_c7.fits' for ACIS-S,                ##
-##         `blanksky-c0-3.fits' for ACIS-I               ##
-##                                                       ##
-## Weitian LI                                            ##
-## 2011/01/11                                            ##
-###########################################################
-
-###########################################################
-## ChangeLogs:
-## v2: 2012/08/01
-##   add ACIS-I support (chips 0-3)
-## v3: 2012/08/06, Junhua Gu
-##   pass parameters by cmd line param
-## v4: 2012/08/13, Weitian LI
-##   add `clobber=yes' parameters to CIAO tools
-##   improve `commandline arguements'
-##   add `default parameters'
-## v5.0, 2015/06/02, Aaron LI
-##   * Replaced 'ls' with '\ls'
-##   * Copy needed pfiles to current working directory, and
-##     set environment variable $PFILES to use these first.
-##   * Strip the directory of asol files in the 'asol*.lis' file.
-##     CIAO-4.6 save the *absolute path* of asol files in 'asol*.lis',
-##     which may cause problems if the data directory was moved later.
-###########################################################
-
-## about, used in `usage' {{{
-VERSION="v4"
-UPDATE="2012-08-14"
-## about }}}
-
-## usage, help {{{
-case "$1" in
-    -[hH]*|--[hH]*)
-        printf "usage:\n"
-        printf "    `basename $0` evt=<evt2_clean> basedir=<base_dir> [ outfile=<outfile_name> ]\n"
-        printf "\nversion:\n"
-        printf "${VERSION}, ${UPDATE}\n"
-        exit ${ERR_USG}
-        ;;
-esac
-## usage, help }}}
-
-## default parameters {{{
-# default `event file' which used to match `blanksky' files
-#DFT_EVT="_NOT_EXIST_"
-DFT_EVT="`\ls evt2*_clean.fits`"
-# default dir which contains `asols, asol.lis, ...' files
-# DFT_BASEDIR="_NOT_EXIST_"
-DFT_BASEDIR=".."
-
-## howto find files in `basedir'
-# default `asol.lis pattern'
-DFT_ASOLIS_PAT="acis*asol?.lis"
-## default parameters }}}
-
-## error code {{{
-ERR_USG=1
-ERR_DIR=11
-ERR_EVT=12
-ERR_BKG=13
-ERR_REG=14
-ERR_ASOL=21
-ERR_BPIX=22
-ERR_PBK=23
-ERR_MSK=24
-ERR_BKGTY=31
-ERR_SPEC=32
-## error code }}}
-
-## functions {{{
-# process commandline arguments
-# cmdline arg format: `KEY=VALUE'
-getopt_keyval() {
-    until [ -z "$1" ]
-    do
-        key=${1%%=*}                    # extract key
-        val=${1#*=}                     # extract value
-        keyval="${key}=\"${val}\""
-        echo "## getopt: eval '${keyval}'"
-        eval ${keyval}
-        shift                           # shift, process next one
-    done
-}
-
-# reprocess blanksky evt with matched gainfile
-blank_regain() {
-    mv $1 ${1%.fits}_ungain.fits
-    punlearn acis_process_events
-    acis_process_events infile="${1%.fits}_ungain.fits" \
-        outfile="$1" \
-        acaofffile=NONE stop="none" doevtgrade=no \
-        apply_cti=yes apply_tgain=no \
-        calculate_pi=yes pix_adj=NONE \
-        gainfile="$2" \
-        eventdef="{s:ccd_id,s:node_id,i:expno,s:chip,s:tdet,f:det,f:sky,s:phas,l:pha,l:pha_ro,f:energy,l:pi,s:fltgrade,s:grade,x:status}" \
-        clobber=yes
-    rm -fv ${1%.fits}_ungain.fits
-}
-## functions end }}}
-
-## parameters {{{
-# process cmdline args using `getopt_keyval'
-getopt_keyval "$@"
-
-# check given parameters
-# check evt file
-if [ -r "${evt}" ]; then
-    EVT=${evt}
-elif [ -r "${DFT_EVT}" ]; then
-    EVT=${DFT_EVT}
-else
-    read -p "evt2 file: " EVT
-    if ! [ -r "${EVT}" ]; then
-        printf "ERROR: cannot access given \`${EVT}' evt file\n"
-        exit ${ERR_EVT}
-    fi
-fi
-printf "## use evt file: \`${EVT}'\n"
-# check given dir
-if [ -d "${basedir}" ]; then
-    BASEDIR=${basedir}
-elif [ -d "${DFT_BASEDIR}" ]; then
-    BASEDIR=${DFT_BASEDIR}
-else
-    read -p "basedir (contains asol files): " BASEDIR
-    if [ ! -d ${BASEDIR} ]; then
-        printf "ERROR: given \`${BASEDIR}' NOT a directory\n"
-        exit ${ERR_DIR}
-    fi
-fi
-# remove the trailing '/'
-BASEDIR=`echo ${BASEDIR} | sed 's/\/*$//'`
-printf "## use basedir: \`${BASEDIR}'\n"
-## parameters }}}
-
-## check files in `basedir' {{{
-# check asol files
-ASOLIS=`\ls -1 ${BASEDIR}/${DFT_ASOLIS_PAT} | head -n 1`
-if [ -z ${ASOLIS} ]; then
-    printf "ERROR: cannot find \"${DFT_ASOLIS_PAT}\" in dir \`${BASEDIR}'\n"
-    exit ${ERR_ASOL}
-fi
-printf "## use asolis: \`${ASOLIS}'\n"
-## check files }}}
-
-## prepare parameter files (pfiles) {{{
-CIAO_TOOLS="acis_bkgrnd_lookup dmmerge dmcopy dmmakepar dmreadpar reproject_events acis_process_events"
-
-# Copy necessary pfiles for localized usage
-for tool in ${CIAO_TOOLS}; do
-    pfile=`paccess ${tool}`
-    [ -n "${pfile}" ] && punlearn ${tool} && cp -Lvf ${pfile} .
-done
-
-# Modify environment variable 'PFILES' to use local pfiles first
-export PFILES="./:${PFILES}"
-## pfiles }}}
-
-#### main start {{{
-# Strip the directory of asol files in the 'asol*.lis' file
-# CIAO-4.6 save the absolute path of asol files in 'asol*.lis' file,
-# which may cause problems if the data directory was moved later.
-mv -fv ${ASOLIS} ${ASOLIS}_bak
-awk -F'/' '{ print $NF }' ${ASOLIS}_bak > ${ASOLIS}
-
-printf "look up coresponding background file ...\n"
-punlearn acis_bkgrnd_lookup
-BKG_LKP="`acis_bkgrnd_lookup ${EVT}`"
-AS_NUM=`echo ${BKG_LKP} | tr ' ' '\n' | \grep 'acis7sD' | wc -l`
-AI_NUM=`echo ${BKG_LKP} | tr ' ' '\n' | \grep 'acis[0123]iD' | wc -l`
-## determine detector type: ACIS-S / ACIS-I {{{
-if [ ${AS_NUM} -eq 1 ]; then
-    printf "## ACIS-S, chip: 7\n"
-    BKG_ROOT="blanksky_c7"
-    cp -v ${BKG_LKP} ${BKG_ROOT}_orig.fits
-elif [ ${AI_NUM} -eq 4 ]; then
-    printf "## ACIS-I, chip: 0-3\n"
-    BKG_ROOT="blanksky_c0-3"
-    AI_FILES=""
-    for bf in ${BKG_LKP}; do
-        cp -v ${bf} .
-        AI_FILES="${AI_FILES},`basename ${bf}`"
-    done
-    AI_FILES=${AI_FILES#,}      # remove the first ','
-    printf "## ACIS-I blanksky files to merge:\n"
-    printf "##   \`${AI_FILES}'\n"
-    printf "\`dmmerge' to merge the above blanksky files ...\n"
-    # merge 4 chips blanksky evt files
-    punlearn dmmerge
-    dmmerge "${AI_FILES}" ${BKG_ROOT}_orig.fits clobber=yes
-    rm -fv `echo ${AI_FILES} | tr ',' ' '`      # remove original files
-else
-    printf "## ERROR: UNKNOW blanksky files:\n"
-    printf "##   ${BKG_ORIG}\n"
-    exit ${ERR_BKG}
-fi
-## determine ACIS type }}}
-
-## check 'DATMODE' {{{
-## filter blanksky files (status=0) for `VFAINT' observations
-DATA_MODE="`dmkeypar ${EVT} DATAMODE echo=yes`"
-printf "## DATAMODE: ${DATA_MODE}\n"
-if [ "${DATA_MODE}" = "VFAINT" ]; then
-    mv -fv ${BKG_ROOT}_orig.fits ${BKG_ROOT}_tmp.fits
-    printf "apply \`status=0' to filter blanksky file ...\n"
-    punlearn dmcopy
-    dmcopy "${BKG_ROOT}_tmp.fits[status=0]" ${BKG_ROOT}_orig.fits clobber=yes
-    rm -fv ${BKG_ROOT}_tmp.fits
-fi
-## DATAMODE, status=0 }}}
-
-## check `GAINFILE' of blanksky and evt2 file {{{
-## if NOT match, then reprocess blanksky
-GAINFILE_EVT="`dmkeypar ${EVT} GAINFILE echo=yes`"
-GAINFILE_BG="`dmkeypar "${BKG_ROOT}_orig.fits" GAINFILE echo=yes`"
-if ! [ "${GAINFILE_EVT}" = "${GAINFILE_BG}" ]; then
-    printf "WARNING: GAINFILE NOT match.\n"
-    printf "event: ${GAINFILE_EVT}\n"
-    printf "blank: ${GAINFILE_BG}\n"
-    printf "reprocess blanksky with evt gainfile ...\n"
-    # reprocess blanksky using matched evt GAINFILE
-    GAINFILE="$CALDB/data/chandra/acis/det_gain/`basename ${GAINFILE_EVT}`"
-    printf "GAINFILE: ${GAINFILE}\n"
-    blank_regain "${BKG_ROOT}_orig.fits" ${GAINFILE}
-fi
-## check & match GAINFILE }}}
-
-printf "add the PNT header keywords ... "
-EVT_HEADER="_evt_header.par"
-EVT_PNT="_evt_pnt.par"
-punlearn dmmakepar
-dmmakepar ${EVT} ${EVT_HEADER} clobber=yes
-\grep -i '_pnt' ${EVT_HEADER} > ${EVT_PNT}
-punlearn dmreadpar
-dmreadpar ${EVT_PNT} "${BKG_ROOT}_orig.fits[EVENTS]" clobber=yes
-printf "DONE\n"
-
-printf "reproject the background ...\n"
-punlearn reproject_events
-reproject_events infile=${BKG_ROOT}_orig.fits \
-    outfile=${BKG_ROOT}.fits match=${EVT} \
-    aspect="@${ASOLIS}" random=0 clobber=yes
-
-# rename output file if specified
-if ! [ -z "${outfile}" ]; then
-    mv -fv ${BKG_ROOT}.fits ${outfile}
-fi
-## main end }}}
-
-# clean
-printf "\nclean ...\n"
-rm -fv ${BKG_ROOT}_orig.fits ${EVT_PNT}
-
-printf "\nFINISHED\n"
-
-# vim: set ts=8 sw=4 tw=0 fenc=utf-8 ft=sh #