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| -rwxr-xr-x | scripts/calc_lx_simple.sh | 133 |
1 files changed, 0 insertions, 133 deletions
diff --git a/scripts/calc_lx_simple.sh b/scripts/calc_lx_simple.sh deleted file mode 100755 index a5ae978..0000000 --- a/scripts/calc_lx_simple.sh +++ /dev/null @@ -1,133 +0,0 @@ -#!/bin/sh -## -## Run calc_lx in BATCH mode -## -## Weitian LI <liweitianux@gmail.com> -## Created: 2012/08/31 -## -UPDATED="2014/06/18" -## -## Changelogs: -## 2015/06/03: -## * Replaced 'grep' with '\grep', 'ls' with '\ls' -## 2014/06/18: -## * use env variable 'MASS_PROFILE_DIR' -## - -unalias -a -export LC_COLLATE=C -# fix path for python -export PATH="/usr/bin:/usr/local/bin:$PATH" - -## usage, `path_conffile' is the configuration file -## which contains the `path' to each `repro/mass' directory -if [ $# -ne 1 ]; then - printf "usage:\n" - printf " `basename $0` <mass_dir>\n" - printf "\nNOTE:\n" - printf " script cannot handle \`~' in path\n" - printf "\nVersion: ${UPDATED}\n" - exit 1 -fi - -## set the path to the script {{{ -if [ -n "${MASS_PROFILE_DIR}" ]; then - CALCLX_SCRIPT="${MASS_PROFILE_DIR}/calc_lx" - CFCALC_SCRIPT="${MASS_PROFILE_DIR}/coolfunc_calc.sh" - FIT_TPRO="${MASS_PROFILE_DIR}/fit_wang2012_model" -else - printf "ERROR: environment variable 'MASS_PROFILE_DIR' not set.\n" - exit 2 -fi - -if [ -z "${CALCLX_SCRIPT}" ]; then - printf "ERROR: \`CALCLX_SCRIPT' not set\n" - exit 250 -elif [ ! -r ${CALCLX_SCRIPT} ]; then - printf "ERROR: CANNOT access script \`${CALCLX_SCRIPT}'\n" - exit 251 -fi -## script path }}} - -# result lines -RES_LINE=100 -# process dir -MDIR="$1" -# mass fitting conf -MCONF="fitting_mass.conf" - -# process -cd ${MDIR} -printf "Entered dir: \``pwd`'\n" -# conf file -if [ ! -r "${MCONF}" ]; then - printf "ERROR: configuration file \`${MCONF}' not accessiable\n" -else - LOGFILE="calclx_`date '+%Y%m%d%H'`.log" - [ -e "${LOGFILE}" ] && mv -fv ${LOGFILE} ${LOGFILE}_bak - TOLOG="tee -a ${LOGFILE}" - # fitting_mass logfile, get R500 from it - MLOG=`\ls ${MCONF%.[confgCONFG]*}*.log | tail -n 1` - R500_VAL=`tail -n ${RES_LINE} ${MLOG} | \grep '^r500' | awk '{ print $2 }'` - R200_VAL=`tail -n ${RES_LINE} ${MLOG} | \grep '^r200' | awk '{ print $2 }'` - # radius_sbp_file {{{ - RSBP=`\grep '^radius_sbp_file' ${MCONF} | awk '{ print $2 }'` - TMP_RSBP="_tmp_rsbp.txt" - [ -e "${TMP_RSBP}" ] && rm -f ${TMP_RSBP} - cat ${RSBP} | sed 's/#.*$//' | \grep -Ev '^\s*$' > ${TMP_RSBP} - RSBP="${TMP_RSBP}" - # rsbp }}} - TPRO_TYPE=`\grep '^t_profile' ${MCONF} | awk '{ print $2 }'` - TPRO_DATA=`\grep '^t_data_file' ${MCONF} | awk '{ print $2 }'` - TPRO_PARA=`\grep '^t_param_file' ${MCONF} | awk '{ print $2 }'` - SBP_CONF=`\grep '^sbp_cfg' ${MCONF} | awk '{ print $2 }'` - ABUND=`\grep '^abund' ${MCONF} | awk '{ print $2 }'` - NH=`\grep '^nh' ${MCONF} | awk '{ print $2 }'` - Z=`\grep '^z' ${SBP_CONF} | awk '{ print $2 }'` - cm_per_pixel=`\grep '^cm_per_pixel' ${SBP_CONF} | awk '{ print $2 }'` - CF_FILE=`\grep '^cfunc_file' ${SBP_CONF} | awk '{ print $2 }'` - printf "## use logfile: \`${LOGFILE}'\n" - printf "## working directory: \``pwd -P`'\n" | ${TOLOG} - printf "## use configuration files: \`${MCONF}, ${SBP_CONF}'\n" | ${TOLOG} - printf "## use radius_sbp_file: \`${RSBP}'\n" | ${TOLOG} - printf "## R500 (kpc): \`${R500_VAL}'\n" | ${TOLOG} - printf "## R200 (kpc): \`${R200_VAL}'\n" | ${TOLOG} - printf "## redshift: \`${Z}'\n" | ${TOLOG} - printf "## abund: \`${ABUND}'\n" | ${TOLOG} - printf "## nh: \`${NH}'\n" | ${TOLOG} - printf "## T_profile type: \`${TPRO_TYPE}'\n" | ${TOLOG} - printf "## cfunc_file: \`${CF_FILE}'\n" | ${TOLOG} - ## fit temperature profile {{{ - T_FILE="_tpro_dump.qdp" - if [ "${TPRO_TYPE}" = "wang2012" ]; then - printf "fitting temperature profile (wang2012) ...\n" - [ -e "wang2012_dump.qdp" ] && mv -fv wang2012_dump.qdp wang2012_dump.qdp_bak - [ -e "fit_result.qdp" ] && mv -fv fit_result.qdp fit_result.qdp_bak - ${FIT_TPRO} ${TPRO_DATA} ${TPRO_PARA} ${cm_per_pixel} 2> /dev/null - mv -fv wang2012_dump.qdp ${T_FILE} - [ -e "wang2012_dump.qdp_bak" ] && mv -fv wang2012_dump.qdp_bak wang2012_dump.qdp - [ -e "fit_result.qdp_bak" ] && mv -fv fit_result.qdp_bak fit_result.qdp - else - printf "ERROR: invalid tprofile type: \`${TPRO_TYPE}'\n" - exit 10 - fi - ## tprofile }}} - ## calc `flux_ratio' {{{ - printf "calc flux_ratio ...\n" - CF_FILE="_cf_data.txt" - FLUX_RATIO="__flux_cnt_ratio.txt" - [ -e "flux_cnt_ratio.txt" ] && mv -fv flux_cnt_ratio.txt flux_cnt_ratio.txt_bak - printf "## CMD: sh ${CFCALC_SCRIPT} ${T_FILE} ${ABUND} ${NH} ${Z} ${CF_FILE}\n" | ${TOLOG} - sh ${CFCALC_SCRIPT} ${T_FILE} ${ABUND} ${NH} ${Z} ${CF_FILE} - mv -fv flux_cnt_ratio.txt ${FLUX_RATIO} - [ -e "flux_cnt_ratio.txt_bak" ] && mv -fv flux_cnt_ratio.txt_bak flux_cnt_ratio.txt - ## flux_ratio }}} - printf "## CMD: ${CALCLX_SCRIPT} ${RSBP} ${FLUX_RATIO} ${Z} ${R500_VAL} ${TPRO_DATA}\n" | ${TOLOG} - printf "## CMD: ${CALCLX_SCRIPT} ${RSBP} ${FLUX_RATIO} ${Z} ${R200_VAL} ${TPRO_DATA}\n" | ${TOLOG} - L500=`${CALCLX_SCRIPT} ${RSBP} ${FLUX_RATIO} ${Z} ${R500_VAL} ${TPRO_DATA} | \grep '^Lx' | awk '{ print $2,$3,$4 }'` - L200=`${CALCLX_SCRIPT} ${RSBP} ${FLUX_RATIO} ${Z} ${R200_VAL} ${TPRO_DATA} | \grep '^Lx' | awk '{ print $2,$3,$4 }'` - printf "L500= ${L500} erg/s\n" | ${TOLOG} - printf "L200= ${L200} erg/s\n" | ${TOLOG} -fi -printf "\n++++++++++++++++++++++++++++++++++++++\n" - |