diff options
Diffstat (limited to 'mass_profile/fit_nfwmass_beta.sh')
| -rwxr-xr-x | mass_profile/fit_nfwmass_beta.sh | 314 |
1 files changed, 314 insertions, 0 deletions
diff --git a/mass_profile/fit_nfwmass_beta.sh b/mass_profile/fit_nfwmass_beta.sh new file mode 100755 index 0000000..1c844b5 --- /dev/null +++ b/mass_profile/fit_nfwmass_beta.sh @@ -0,0 +1,314 @@ +#!/bin/sh + +# modified by LIweitaNux, 2012/09/06 +# export PATH="$ASCDS_BIN:$PATH" +export PATH="/usr/local/bin:/usr/bin:/bin:$PATH" + +if [ $# -eq 1 ]; then + : +elif [ $# -eq 2 ]; then + CENTER_VAL="YES" +else + printf "usage:\n" + printf " `basename $0` <cfg_file> [c]" + exit 1 +fi + +if ! which xspec > /dev/null; then + printf "*** ERROR: please initialize HEASOFT first\n" + exit 2 +fi + +if [ -z "${HEADAS}" ]; then + printf "*** ERROR: variable \`HEADAS' not properly set\n" + exit 3 +fi + +export PGPLOT_FONT="${HEADAS}/lib/grfont.dat" +printf "## PGPLOT_FONT: \`${PGPLOT_FONT}'\n" + +if [ "$0" = `basename $0` ]; then + script_path=`which $0` + base_path=`dirname ${script_path}` +else + base_path=`dirname $0` +fi +printf "## base_path: \`${base_path}'\n" +cfg_file="$1" +printf "## use configuration file: \`${cfg_file}'\n" + +# rmin for fit_nfw_mass +nfw_rmin_kpc=`grep '^nfw_rmin_kpc' $cfg_file | awk '{ print $2 }'` +# profile type name +t_profile_type=`grep '^t_profile' $cfg_file | awk '{ print $2 }'` +printf "## t_profile_type: \`$t_profile_type'\n" +# data file name +t_data_file=`grep '^t_data_file' $cfg_file | awk '{ print $2 }'` +t_param_file=`grep '^t_param_file' $cfg_file | awk '{ print $2 }'` +# sbp config file +sbp_cfg=`grep '^sbp_cfg' $cfg_file | awk '{ print $2 }'` +# temperature profile file +T_file=`grep '^T_file' $sbp_cfg | awk '{ print $2 }'` +cfunc_file=`grep '^cfunc_file' ${sbp_cfg} |awk '{ print $2 }'` +abund=`grep '^abund' ${cfg_file} |awk '{ print $2 }'` +nh=`grep '^nh' ${cfg_file} |awk '{ print $2 }'` +## calc `cm_per_pixel' instead {{{ +# cm_per_pixel=`grep '^cm_per_pixel' $sbp_cfg | awk '{ print $2 }'` +z=`grep '^z' $sbp_cfg | awk '{ print $2 }'` +cm_per_pixel=`${base_path}/calc_distance ${z} | grep 'cm_per_pixel' | awk '{ print $2 }'` +sed -i'' "s/^cm_per_pixel.*$/cm_per_pixel ${cm_per_pixel}/" ${sbp_cfg} +printf "## redshift: ${z}, cm_per_pixel: ${cm_per_pixel}\n" +## cm_per_pixel }}} +da=`python -c "print($cm_per_pixel/(.492/3600/180*3.1415926))"` +dl=`python -c "print($da*(1+$z)**2)"` +printf "da= ${da}\n" +printf "dl= ${dl}\n" +## sbp {{{ +sbp_data_file=`grep '^sbp_file' $sbp_cfg | awk '{ print $2 }'` +radius_sbp_file=`grep '^radius_sbp_file' ${cfg_file} | awk '{ print $2 }'` + +if [ "x$radius_sbp_file" = "x" ]; then + printf "*** ERROR: radius_sbp_file not found\n" + exit 200 +fi + +TMP_RSBP="_tmp_rsbp.txt" +[ -e "${TMP_RSBP}" ] && rm -f ${TMP_RSBP} +cat ${radius_sbp_file} | sed 's/#.*$//' | grep -Ev '^\s*$' > ${TMP_RSBP} +# mv -f _tmp_rsbp.txt ${radius_sbp_file} +radius_sbp_file="${TMP_RSBP}" +## sbp }}} + +# determine which temperature profile to be used, and fit the T profile {{{ +if [ "$t_profile_type" = "zyy" ]; then + $base_path/fit_zyy_model $t_data_file $t_param_file $cm_per_pixel + # mv -f zyy_dump.qdp ${T_file} + mv -f zyy_dump.qdp zyy_dump_center.qdp +elif [ "$t_profile_type" = "m0603246" ]; then + $base_path/fit_m0603246 $t_data_file $cm_per_pixel + # mv -f m0603246_dump.qdp ${T_file} + mv -f m0603246_dump.qdp m0603246_dump_center.qdp +elif [ "$t_profile_type" = "wang2012" ]; then + T_param_center="wang2012_center_param.txt" + T_file_center="wang2012_dump_center.qdp" + $base_path/fit_wang2012_model $t_data_file $t_param_file $cm_per_pixel 2> /dev/null | tee ${T_param_center} + # mv -f wang2012_dump.qdp ${T_file} + cp -fv wang2012_dump.qdp ${T_file} + mv -fv wang2012_dump.qdp ${T_file_center} + mv -fv fit_result.qdp wang2012_fit_center.qdp +elif [ "$t_profile_type" = "allen" ]; then + $base_path/fit_allen_model $t_data_file $cm_per_pixel + # mv -f allen_dump.qdp ${T_file} + mv -f allen_dump.qdp allen_dump_center.qdp +elif [ "$t_profile_type" = "zzl" ]; then + $base_path/fit_zzl_model $t_data_file $t_param_file + # mv -f zzl_dump.qdp ${T_file} + mv -f zzl_dump.qdp zzl_dump_center.qdp +else + printf "ERROR: temperature profile name \`${t_profile_type}' invalid!\n" + exit 10 +fi +# temp profile }}} + +$base_path/coolfunc_calc2.sh ${T_file_center} $abund $nh $z $cfunc_file cfunc_bolo.dat +cfunc_file_center="coolfunc_data_center.txt" +cp -f ${cfunc_file} ${cfunc_file_center} +mv -fv flux_cnt_ratio.txt flux_cnt_ratio_center.txt +# fit sbp (single-beta) +MODEL="single-beta" +SBP_PROG="fit_beta_sbp" +RES_SBPFIT="beta_param.txt" +RES_SBPFIT_CENTER="beta_param_center.txt" +${base_path}/${SBP_PROG} $sbp_cfg 2> /dev/null +mv -fv ${RES_SBPFIT} ${RES_SBPFIT_CENTER} +cat ${RES_SBPFIT_CENTER} +mv -fv sbp_fit.qdp sbp_fit_center.qdp +mv -fv rho_fit.qdp rho_fit_center.qdp +mv -fv rho_fit.dat rho_fit_center.dat +$base_path/fit_nfw_mass mass_int.dat $z $nfw_rmin_kpc 2> /dev/null +mv -fv nfw_param.txt nfw_param_center.txt +mv -fv nfw_fit_result.qdp nfw_fit_center.qdp +mv -fv nfw_dump.qdp mass_int_center.qdp +mv -fv overdensity.qdp overdensity_center.qdp +mv -fv gas_mass_int.qdp gas_mass_int_center.qdp + +#exit 233 + +## cooling time (-> use 'ciao_calc_ct.sh') +$base_path/cooling_time rho_fit_center.dat ${T_file_center} cfunc_bolo.dat $dl $cm_per_pixel > cooling_time.dat +## radius to calculate tcool, not the cooling time! +rcool=`$base_path/analyze_mass_profile.py 500 c | grep '^r500' | awk -F'=' '{ print .048*$2 }'` +printf "rcool= ${rcool}\n" + +## center value {{{ +if [ "${CENTER_VAL}" = "YES" ]; then + RES_CENTER="center_only_results.txt" + [ -e "${RES_CENTER}" ] && mv -f ${RES_CENTER} ${RES_CENTER}_bak + $base_path/analyze_mass_profile.py 200 c | tee -a ${RES_CENTER} + $base_path/analyze_mass_profile.py 500 c | tee -a ${RES_CENTER} + $base_path/analyze_mass_profile.py 1500 c | tee -a ${RES_CENTER} + $base_path/analyze_mass_profile.py 2500 c | tee -a ${RES_CENTER} + $base_path/extract_tcool.py $rcool | tee -a ${RES_CENTER} + $base_path/fg_2500_500.py c | tee -a ${RES_CENTER} + exit 0 +fi +## center value }}} + +# clean previous files +rm -f summary_shuffle_mass_profile.qdp +rm -f summary_overdensity.qdp +rm -f summary_mass_profile.qdp +rm -f summary_gas_mass_profile.qdp + +## count +COUNT=1 + +#100 times of Monte-carlo simulation to determine error +#just repeat above steps +printf "\n+++++++++++++++++++ Monte Carlo +++++++++++++++++++++\n" +for i in `seq 1 100`; do + # echo $t_data_file + $base_path/shuffle_T.py $t_data_file temp_shuffled_t.dat + $base_path/shuffle_sbp.py $sbp_data_file temp_shuffled_sbp.dat + # t_data_file=temp_shuffled_t.dat +#exit + + if [ "$t_profile_type" = "zyy" ]; then + $base_path/fit_zyy_model temp_shuffled_t.dat $t_param_file $cm_per_pixel + mv -f zyy_dump.qdp ${T_file} + elif [ "$t_profile_type" = "m0603246" ]; then + $base_path/fit_m0603246 temp_shuffled_t.dat $cm_per_pixel + mv -f m0603246_dump.qdp ${T_file} + elif [ "$t_profile_type" = "wang2012" ]; then + $base_path/fit_wang2012_model temp_shuffled_t.dat $t_param_file $cm_per_pixel 2> /dev/null + mv -f wang2012_dump.qdp ${T_file} + elif [ "$t_profile_type" = "allen" ]; then + $base_path/fit_allen_model temp_shuffled_t.dat $cm_per_pixel + mv -f allen_dump.qdp ${T_file} + elif [ "$t_profile_type" = "zzl" ]; then + $base_path/fit_zzl_model temp_shuffled_t.dat $t_param_file + mv -f zzl_dump.qdp ${T_file} + else + printf "ERROR: temperature profile name \`${t_profile_type}' invalid!\n" + exit 10 + fi + + #exit + + # clear ${TMP_SBP_CFG} + TMP_SBP_CFG="temp_sbp.cfg" + # : > ${TMP_SBP_CFG} + [ -e "${TMP_SBP_CFG}" ] && rm -f ${TMP_SBP_CFG} + + cat $sbp_cfg | while read l; do + if echo "$l" | grep -q 'sbp_file'; then + echo "sbp_file temp_shuffled_sbp.dat" >> ${TMP_SBP_CFG} + elif echo "$l" | grep -q 'T_file'; then + echo "T_file ${T_file}" >> ${TMP_SBP_CFG} + else + echo "$l" >> ${TMP_SBP_CFG} + fi + done + + ## count + printf "## ${COUNT} ##\n" + COUNT=`expr ${COUNT} + 1` + printf "## `pwd` ##\n" + $base_path/coolfunc_calc2.sh ${T_file} ${abund} ${nh} ${z} ${cfunc_file} + + ${base_path}/${SBP_PROG} ${TMP_SBP_CFG} 2> /dev/null + cat ${RES_SBPFIT} + $base_path/fit_nfw_mass mass_int.dat ${z} ${nfw_rmin_kpc} 2> /dev/null + cat nfw_dump.qdp >> summary_mass_profile.qdp + echo "no no no" >> summary_mass_profile.qdp + cat overdensity.qdp >> summary_overdensity.qdp + echo "no no no" >> summary_overdensity.qdp + cat gas_mass_int.qdp >> summary_gas_mass_profile.qdp + echo "no no no" >> summary_gas_mass_profile.qdp + +done # end `while' +# recover `center_files' +cp -f ${cfunc_file_center} ${cfunc_file} +cp -f ${T_file_center} ${T_file} +printf "\n+++++++++++++++++ MONTE CARLO END +++++++++++++++++++\n" + +## analyze results +RES_TMP="_tmp_result_mrl.txt" +RES_FINAL="final_result.txt" +[ -e "${RES_TMP}" ] && mv -fv ${RES_TMP} ${RES_TMP}_bak +[ -e "${RES_FINAL}" ] && mv -fv ${RES_FINAL} ${RES_FINAL}_bak + +$base_path/analyze_mass_profile.py 200 | tee -a ${RES_TMP} +$base_path/analyze_mass_profile.py 500 | tee -a ${RES_TMP} +$base_path/analyze_mass_profile.py 1500 | tee -a ${RES_TMP} +$base_path/analyze_mass_profile.py 2500 | tee -a ${RES_TMP} + +R200_VAL=`grep '^r200' ${RES_TMP} | awk '{ print $2 }'` +R500_VAL=`grep '^r500' ${RES_TMP} | awk '{ print $2 }'` +R1500_VAL=`grep '^r1500' ${RES_TMP} | awk '{ print $2 }'` +R2500_VAL=`grep '^r2500' ${RES_TMP} | awk '{ print $2 }'` +printf "## R200: ${R200_VAL}\n" +printf "## R500: ${R500_VAL}\n" +printf "## R1500: ${R1500_VAL}\n" +printf "## R2500: ${R2500_VAL}\n" +L200E=`$base_path/calc_lx $radius_sbp_file flux_cnt_ratio_center.txt $z $R200_VAL $t_data_file | grep '^Lx' | awk '{ print $2,$3,$4 }'` +L500E=`$base_path/calc_lx $radius_sbp_file flux_cnt_ratio_center.txt $z $R500_VAL $t_data_file | grep '^Lx' | awk '{ print $2,$3,$4 }'` +L1500E=`$base_path/calc_lx $radius_sbp_file flux_cnt_ratio_center.txt $z $R1500_VAL $t_data_file | grep '^Lx' | awk '{ print $2,$3,$4 }'` +L2500E=`$base_path/calc_lx $radius_sbp_file flux_cnt_ratio_center.txt $z $R2500_VAL $t_data_file | grep '^Lx' | awk '{ print $2,$3,$4 }'` +R200E=`grep '^r200' ${RES_TMP} | tail -n 1 | awk '{ print $2,$3 }'` +R500E=`grep '^r500' ${RES_TMP} | tail -n 1 | awk '{ print $2,$3 }'` +R1500E=`grep '^r1500' ${RES_TMP} | tail -n 1 | awk '{ print $2,$3 }'` +R2500E=`grep '^r2500' ${RES_TMP} | tail -n 1 | awk '{ print $2,$3 }'` +M200E=`grep '^m200' ${RES_TMP} | tail -n 1 | awk '{ print $2,$3 }'` +M500E=`grep '^m500' ${RES_TMP} | tail -n 1 | awk '{ print $2,$3 }'` +M1500E=`grep '^m1500' ${RES_TMP} | tail -n 1 | awk '{ print $2,$3 }'` +M2500E=`grep '^m2500' ${RES_TMP} | tail -n 1 | awk '{ print $2,$3 }'` +MG200E=`grep '^gas_m200' ${RES_TMP} | tail -n 1 | awk '{ print $2,$3 }'` +MG500E=`grep '^gas_m500' ${RES_TMP} | tail -n 1 | awk '{ print $2,$3 }'` +MG1500E=`grep '^gas_m1500' ${RES_TMP} | tail -n 1 | awk '{ print $2,$3 }'` +MG2500E=`grep '^gas_m2500' ${RES_TMP} | tail -n 1 | awk '{ print $2,$3 }'` +FG200E=`grep '^gas_fraction200' ${RES_TMP} | tail -n 1 | awk '{ print $2,$3 }'` +FG500E=`grep '^gas_fraction500' ${RES_TMP} | tail -n 1 | awk '{ print $2,$3 }'` +FG1500E=`grep '^gas_fraction1500' ${RES_TMP} | tail -n 1 | awk '{ print $2,$3 }'` +FG2500E=`grep '^gas_fraction2500' ${RES_TMP} | tail -n 1 | awk '{ print $2,$3 }'` + +printf "\n+++++++++++++++ RESULTS (${MODEL}) +++++++++++++++\n" +printf "cfg: ${cfg_file}\n" | tee -a ${RES_FINAL} +printf "model: ${MODEL}\n" | tee -a ${RES_FINAL} +printf "\n" | tee -a ${RES_FINAL} +cat ${RES_SBPFIT_CENTER} | tee -a ${RES_FINAL} +printf "\n" | tee -a ${RES_FINAL} +printf "r200= ${R200E} kpc\n" | tee -a ${RES_FINAL} +printf "m200= ${M200E} M_sun\n" | tee -a ${RES_FINAL} +printf "L200= ${L200E} erg/s\n" | tee -a ${RES_FINAL} +printf "gas_m200= ${MG200E} M_sun\n" | tee -a ${RES_FINAL} +printf "gas_fraction200= ${FG200E} x100%%\n" | tee -a ${RES_FINAL} +printf "r500= ${R500E} kpc\n" | tee -a ${RES_FINAL} +printf "m500= ${M500E} M_sun\n" | tee -a ${RES_FINAL} +printf "L500= ${L500E} erg/s\n" | tee -a ${RES_FINAL} +printf "gas_m500= ${MG500E} M_sun\n" | tee -a ${RES_FINAL} +printf "gas_fraction500= ${FG500E} x100%%\n" | tee -a ${RES_FINAL} +printf "r1500= ${R1500E} kpc\n" | tee -a ${RES_FINAL} +printf "m1500= ${M1500E} M_sun\n" | tee -a ${RES_FINAL} +printf "L1500= ${L1500E} erg/s\n" | tee -a ${RES_FINAL} +printf "gas_m1500= ${MG1500E} M_sun\n" | tee -a ${RES_FINAL} +printf "gas_fraction1500= ${FG1500E} x100%%\n" | tee -a ${RES_FINAL} +printf "r2500= ${R2500E} kpc\n" | tee -a ${RES_FINAL} +printf "m2500= ${M2500E} M_sun\n" | tee -a ${RES_FINAL} +printf "L2500= ${L2500E} erg/s\n" | tee -a ${RES_FINAL} +printf "gas_m2500= ${MG2500E} M_sun\n" | tee -a ${RES_FINAL} +printf "gas_fraction2500= ${FG2500E} x100%%\n" | tee -a ${RES_FINAL} +printf "\n" | tee -a ${RES_FINAL} +printf "gas mass 200= ${MG200E} M_sun\n" | tee -a ${RES_FINAL} +printf "gas fractho 200= ${FG200E} x100%%\n" | tee -a ${RES_FINAL} +printf "gas mass 500= ${MG500E} M_sun\n" | tee -a ${RES_FINAL} +printf "gas fractho 500= ${FG500E} x100%%\n" | tee -a ${RES_FINAL} +printf "gas mass 1500= ${MG1500E} M_sun\n" | tee -a ${RES_FINAL} +printf "gas fractho 1500= ${FG1500E} x100%%\n" | tee -a ${RES_FINAL} +printf "gas mass 2500= ${MG2500E} M_sun\n" | tee -a ${RES_FINAL} +printf "gas fractho 2500= ${FG2500E} x100%%\n" | tee -a ${RES_FINAL} +printf "\n" | tee -a ${RES_FINAL} +$base_path/extract_tcool.py $rcool | tee -a ${RES_FINAL} +$base_path/fg_2500_500.py | tee -a ${RES_FINAL} +printf "\n+++++++++++++++++++++++++++++++++++++++++++++++++++++\n" + |