diff options
Diffstat (limited to 'mass_profile/fit_nfwmass_dbeta.sh')
| -rwxr-xr-x | mass_profile/fit_nfwmass_dbeta.sh | 314 |
1 files changed, 0 insertions, 314 deletions
diff --git a/mass_profile/fit_nfwmass_dbeta.sh b/mass_profile/fit_nfwmass_dbeta.sh deleted file mode 100755 index 1e9b7c1..0000000 --- a/mass_profile/fit_nfwmass_dbeta.sh +++ /dev/null @@ -1,314 +0,0 @@ -#!/bin/sh - -# modified by LIweitaNux, 2012/09/06 -# export PATH="$ASCDS_BIN:$PATH" -export PATH="/usr/local/bin:/usr/bin:/bin:$PATH" - -if [ $# -eq 1 ]; then - : -elif [ $# -eq 2 ]; then - CENTER_VAL="YES" -else - printf "usage:\n" - printf " `basename $0` <cfg_file> [c]" - exit 1 -fi - -if ! which xspec > /dev/null; then - printf "*** ERROR: please initialize HEASOFT first\n" - exit 2 -fi - -if [ -z "${HEADAS}" ]; then - printf "*** ERROR: variable \`HEADAS' not properly set\n" - exit 3 -fi - -export PGPLOT_FONT="${HEADAS}/lib/grfont.dat" -printf "## PGPLOT_FONT: \`${PGPLOT_FONT}'\n" - -if [ "$0" = `basename $0` ]; then - script_path=`which $0` - base_path=`dirname ${script_path}` -else - base_path=`dirname $0` -fi -printf "## base_path: \`${base_path}'\n" -cfg_file="$1" -printf "## use configuration file: \`${cfg_file}'\n" - -# rmin for fit_nfw_mass -nfw_rmin_kpc=`grep '^nfw_rmin_kpc' $cfg_file | awk '{ print $2 }'` -# profile type name -t_profile_type=`grep '^t_profile' $cfg_file | awk '{ print $2 }'` -printf "## t_profile_type: \`$t_profile_type'\n" -# data file name -t_data_file=`grep '^t_data_file' $cfg_file | awk '{ print $2 }'` -t_param_file=`grep '^t_param_file' $cfg_file | awk '{ print $2 }'` -# sbp config file -sbp_cfg=`grep '^sbp_cfg' $cfg_file | awk '{ print $2 }'` -# temperature profile file -T_file=`grep '^T_file' $sbp_cfg | awk '{ print $2 }'` -cfunc_file=`grep '^cfunc_file' ${sbp_cfg} |awk '{ print $2 }'` -abund=`grep '^abund' ${cfg_file} |awk '{ print $2 }'` -nh=`grep '^nh' ${cfg_file} |awk '{ print $2 }'` -## calc `cm_per_pixel' instead {{{ -# cm_per_pixel=`grep '^cm_per_pixel' $sbp_cfg | awk '{ print $2 }'` -z=`grep '^z' $sbp_cfg | awk '{ print $2 }'` -cm_per_pixel=`${base_path}/calc_distance ${z} | grep 'cm_per_pixel' | awk '{ print $2 }'` -sed -i'' "s/^cm_per_pixel.*$/cm_per_pixel ${cm_per_pixel}/" ${sbp_cfg} -printf "## redshift: ${z}, cm_per_pixel: ${cm_per_pixel}\n" -## cm_per_pixel }}} -da=`python -c "print($cm_per_pixel/(.492/3600/180*3.1415926))"` -dl=`python -c "print($da*(1+$z)**2)"` -printf "da= ${da}\n" -printf "dl= ${dl}\n" -## sbp {{{ -sbp_data_file=`grep '^sbp_file' $sbp_cfg | awk '{ print $2 }'` -radius_sbp_file=`grep '^radius_sbp_file' ${cfg_file} | awk '{ print $2 }'` - -if [ "x$radius_sbp_file" = "x" ]; then - printf "*** ERROR: radius_sbp_file not found\n" - exit 200 -fi - -TMP_RSBP="_tmp_rsbp.txt" -[ -e "${TMP_RSBP}" ] && rm -f ${TMP_RSBP} -cat ${radius_sbp_file} | sed 's/#.*$//' | grep -Ev '^\s*$' > ${TMP_RSBP} -# mv -f _tmp_rsbp.txt ${radius_sbp_file} -radius_sbp_file="${TMP_RSBP}" -## sbp }}} - -# determine which temperature profile to be used, and fit the T profile {{{ -if [ "$t_profile_type" = "zyy" ]; then - $base_path/fit_zyy_model $t_data_file $t_param_file $cm_per_pixel - # mv -f zyy_dump.qdp ${T_file} - mv -f zyy_dump.qdp zyy_dump_center.qdp -elif [ "$t_profile_type" = "m0603246" ]; then - $base_path/fit_m0603246 $t_data_file $cm_per_pixel - # mv -f m0603246_dump.qdp ${T_file} - mv -f m0603246_dump.qdp m0603246_dump_center.qdp -elif [ "$t_profile_type" = "wang2012" ]; then - T_param_center="wang2012_center_param.txt" - T_file_center="wang2012_dump_center.qdp" - $base_path/fit_wang2012_model $t_data_file $t_param_file $cm_per_pixel 2> /dev/null | tee ${T_param_center} - # mv -f wang2012_dump.qdp ${T_file} - cp -fv wang2012_dump.qdp ${T_file} - mv -fv wang2012_dump.qdp ${T_file_center} - mv -fv fit_result.qdp wang2012_fit_center.qdp -elif [ "$t_profile_type" = "allen" ]; then - $base_path/fit_allen_model $t_data_file $cm_per_pixel - # mv -f allen_dump.qdp ${T_file} - mv -f allen_dump.qdp allen_dump_center.qdp -elif [ "$t_profile_type" = "zzl" ]; then - $base_path/fit_zzl_model $t_data_file $t_param_file - # mv -f zzl_dump.qdp ${T_file} - mv -f zzl_dump.qdp zzl_dump_center.qdp -else - printf "ERROR: temperature profile name \`${t_profile_type}' invalid!\n" - exit 10 -fi -# temp profile }}} - -$base_path/coolfunc_calc2.sh ${T_file_center} $abund $nh $z $cfunc_file cfunc_bolo.dat -cfunc_file_center="coolfunc_data_center.txt" -cp -f ${cfunc_file} ${cfunc_file_center} -mv -fv flux_cnt_ratio.txt flux_cnt_ratio_center.txt -# fit sbp (double-beta) -MODEL="double-beta" -SBP_PROG="fit_dbeta_sbp" -RES_SBPFIT="dbeta_param.txt" -RES_SBPFIT_CENTER="dbeta_param_center.txt" -${base_path}/${SBP_PROG} $sbp_cfg 2> /dev/null -mv -fv ${RES_SBPFIT} ${RES_SBPFIT_CENTER} -cat ${RES_SBPFIT_CENTER} -mv -fv sbp_fit.qdp sbp_fit_center.qdp -mv -fv rho_fit.qdp rho_fit_center.qdp -mv -fv rho_fit.dat rho_fit_center.dat -$base_path/fit_nfw_mass mass_int.dat $z $nfw_rmin_kpc 2> /dev/null -mv -fv nfw_param.txt nfw_param_center.txt -mv -fv nfw_fit_result.qdp nfw_fit_center.qdp -mv -fv nfw_dump.qdp mass_int_center.qdp -mv -fv overdensity.qdp overdensity_center.qdp -mv -fv gas_mass_int.qdp gas_mass_int_center.qdp - -#exit 233 - -## cooling time (-> use 'ciao_calc_ct.sh') -$base_path/cooling_time rho_fit_center.dat ${T_file_center} cfunc_bolo.dat $dl $cm_per_pixel > cooling_time.dat -## radius to calculate tcool, not the cooling time! -rcool=`$base_path/analyze_mass_profile.py 500 c | grep '^r500' | awk -F'=' '{ print .048*$2 }'` -printf "rcool= ${rcool}\n" - -## center value {{{ -if [ "${CENTER_VAL}" = "YES" ]; then - RES_CENTER="center_only_results.txt" - [ -e "${RES_CENTER}" ] && mv -f ${RES_CENTER} ${RES_CENTER}_bak - $base_path/analyze_mass_profile.py 200 c | tee -a ${RES_CENTER} - $base_path/analyze_mass_profile.py 500 c | tee -a ${RES_CENTER} - $base_path/analyze_mass_profile.py 1500 c | tee -a ${RES_CENTER} - $base_path/analyze_mass_profile.py 2500 c | tee -a ${RES_CENTER} - $base_path/extract_tcool.py $rcool | tee -a ${RES_CENTER} - $base_path/fg_2500_500.py c | tee -a ${RES_CENTER} - exit 0 -fi -## center value }}} - -# clean previous files -rm -f summary_shuffle_mass_profile.qdp -rm -f summary_overdensity.qdp -rm -f summary_mass_profile.qdp -rm -f summary_gas_mass_profile.qdp - -## count -COUNT=1 - -#100 times of Monte-carlo simulation to determine error -#just repeat above steps -printf "\n+++++++++++++++++++ Monte Carlo +++++++++++++++++++++\n" -for i in `seq 1 100`; do - # echo $t_data_file - $base_path/shuffle_T.py $t_data_file temp_shuffled_t.dat - $base_path/shuffle_sbp.py $sbp_data_file temp_shuffled_sbp.dat - # t_data_file=temp_shuffled_t.dat -#exit - - if [ "$t_profile_type" = "zyy" ]; then - $base_path/fit_zyy_model temp_shuffled_t.dat $t_param_file $cm_per_pixel - mv -f zyy_dump.qdp ${T_file} - elif [ "$t_profile_type" = "m0603246" ]; then - $base_path/fit_m0603246 temp_shuffled_t.dat $cm_per_pixel - mv -f m0603246_dump.qdp ${T_file} - elif [ "$t_profile_type" = "wang2012" ]; then - $base_path/fit_wang2012_model temp_shuffled_t.dat $t_param_file $cm_per_pixel 2> /dev/null - mv -f wang2012_dump.qdp ${T_file} - elif [ "$t_profile_type" = "allen" ]; then - $base_path/fit_allen_model temp_shuffled_t.dat $cm_per_pixel - mv -f allen_dump.qdp ${T_file} - elif [ "$t_profile_type" = "zzl" ]; then - $base_path/fit_zzl_model temp_shuffled_t.dat $t_param_file - mv -f zzl_dump.qdp ${T_file} - else - printf "ERROR: temperature profile name \`${t_profile_type}' invalid!\n" - exit 10 - fi - - #exit - - # clear ${TMP_SBP_CFG} - TMP_SBP_CFG="temp_sbp.cfg" - # : > ${TMP_SBP_CFG} - [ -e "${TMP_SBP_CFG}" ] && rm -f ${TMP_SBP_CFG} - - cat $sbp_cfg | while read l; do - if echo "$l" | grep -q 'sbp_file'; then - echo "sbp_file temp_shuffled_sbp.dat" >> ${TMP_SBP_CFG} - elif echo "$l" | grep -q 'T_file'; then - echo "T_file ${T_file}" >> ${TMP_SBP_CFG} - else - echo "$l" >> ${TMP_SBP_CFG} - fi - done - - ## count - printf "## ${COUNT} ##\n" - COUNT=`expr ${COUNT} + 1` - printf "## `pwd` ##\n" - $base_path/coolfunc_calc2.sh ${T_file} ${abund} ${nh} ${z} ${cfunc_file} - - ${base_path}/${SBP_PROG} ${TMP_SBP_CFG} 2> /dev/null - cat ${RES_SBPFIT} - $base_path/fit_nfw_mass mass_int.dat ${z} ${nfw_rmin_kpc} 2> /dev/null - cat nfw_dump.qdp >> summary_mass_profile.qdp - echo "no no no" >> summary_mass_profile.qdp - cat overdensity.qdp >> summary_overdensity.qdp - echo "no no no" >> summary_overdensity.qdp - cat gas_mass_int.qdp >> summary_gas_mass_profile.qdp - echo "no no no" >> summary_gas_mass_profile.qdp - -done # end `while' -# recover `center_files' -cp -f ${cfunc_file_center} ${cfunc_file} -cp -f ${T_file_center} ${T_file} -printf "\n+++++++++++++++++ MONTE CARLO END +++++++++++++++++++\n" - -## analyze results -RES_TMP="_tmp_result_mrl.txt" -RES_FINAL="final_result.txt" -[ -e "${RES_TMP}" ] && mv -fv ${RES_TMP} ${RES_TMP}_bak -[ -e "${RES_FINAL}" ] && mv -fv ${RES_FINAL} ${RES_FINAL}_bak - -$base_path/analyze_mass_profile.py 200 | tee -a ${RES_TMP} -$base_path/analyze_mass_profile.py 500 | tee -a ${RES_TMP} -$base_path/analyze_mass_profile.py 1500 | tee -a ${RES_TMP} -$base_path/analyze_mass_profile.py 2500 | tee -a ${RES_TMP} - -R200_VAL=`grep '^r200' ${RES_TMP} | awk '{ print $2 }'` -R500_VAL=`grep '^r500' ${RES_TMP} | awk '{ print $2 }'` -R1500_VAL=`grep '^r1500' ${RES_TMP} | awk '{ print $2 }'` -R2500_VAL=`grep '^r2500' ${RES_TMP} | awk '{ print $2 }'` -printf "## R200: ${R200_VAL}\n" -printf "## R500: ${R500_VAL}\n" -printf "## R1500: ${R1500_VAL}\n" -printf "## R2500: ${R2500_VAL}\n" -L200E=`$base_path/calc_lx $radius_sbp_file flux_cnt_ratio_center.txt $z $R200_VAL $t_data_file | grep '^Lx' | awk '{ print $2,$3,$4 }'` -L500E=`$base_path/calc_lx $radius_sbp_file flux_cnt_ratio_center.txt $z $R500_VAL $t_data_file | grep '^Lx' | awk '{ print $2,$3,$4 }'` -L1500E=`$base_path/calc_lx $radius_sbp_file flux_cnt_ratio_center.txt $z $R1500_VAL $t_data_file | grep '^Lx' | awk '{ print $2,$3,$4 }'` -L2500E=`$base_path/calc_lx $radius_sbp_file flux_cnt_ratio_center.txt $z $R2500_VAL $t_data_file | grep '^Lx' | awk '{ print $2,$3,$4 }'` -R200E=`grep '^r200' ${RES_TMP} | tail -n 1 | awk '{ print $2,$3 }'` -R500E=`grep '^r500' ${RES_TMP} | tail -n 1 | awk '{ print $2,$3 }'` -R1500E=`grep '^r1500' ${RES_TMP} | tail -n 1 | awk '{ print $2,$3 }'` -R2500E=`grep '^r2500' ${RES_TMP} | tail -n 1 | awk '{ print $2,$3 }'` -M200E=`grep '^m200' ${RES_TMP} | tail -n 1 | awk '{ print $2,$3 }'` -M500E=`grep '^m500' ${RES_TMP} | tail -n 1 | awk '{ print $2,$3 }'` -M1500E=`grep '^m1500' ${RES_TMP} | tail -n 1 | awk '{ print $2,$3 }'` -M2500E=`grep '^m2500' ${RES_TMP} | tail -n 1 | awk '{ print $2,$3 }'` -MG200E=`grep '^gas_m200' ${RES_TMP} | tail -n 1 | awk '{ print $2,$3 }'` -MG500E=`grep '^gas_m500' ${RES_TMP} | tail -n 1 | awk '{ print $2,$3 }'` -MG1500E=`grep '^gas_m1500' ${RES_TMP} | tail -n 1 | awk '{ print $2,$3 }'` -MG2500E=`grep '^gas_m2500' ${RES_TMP} | tail -n 1 | awk '{ print $2,$3 }'` -FG200E=`grep '^gas_fraction200' ${RES_TMP} | tail -n 1 | awk '{ print $2,$3 }'` -FG500E=`grep '^gas_fraction500' ${RES_TMP} | tail -n 1 | awk '{ print $2,$3 }'` -FG1500E=`grep '^gas_fraction1500' ${RES_TMP} | tail -n 1 | awk '{ print $2,$3 }'` -FG2500E=`grep '^gas_fraction2500' ${RES_TMP} | tail -n 1 | awk '{ print $2,$3 }'` - -printf "\n+++++++++++++++ RESULTS (${MODEL}) +++++++++++++++\n" -printf "cfg: ${cfg_file}\n" | tee -a ${RES_FINAL} -printf "model: ${MODEL}\n" | tee -a ${RES_FINAL} -printf "\n" | tee -a ${RES_FINAL} -cat ${RES_SBPFIT_CENTER} | tee -a ${RES_FINAL} -printf "\n" | tee -a ${RES_FINAL} -printf "r200= ${R200E} kpc\n" | tee -a ${RES_FINAL} -printf "m200= ${M200E} M_sun\n" | tee -a ${RES_FINAL} -printf "L200= ${L200E} erg/s\n" | tee -a ${RES_FINAL} -printf "gas_m200= ${MG200E} M_sun\n" | tee -a ${RES_FINAL} -printf "gas_fraction200= ${FG200E} x100%%\n" | tee -a ${RES_FINAL} -printf "r500= ${R500E} kpc\n" | tee -a ${RES_FINAL} -printf "m500= ${M500E} M_sun\n" | tee -a ${RES_FINAL} -printf "L500= ${L500E} erg/s\n" | tee -a ${RES_FINAL} -printf "gas_m500= ${MG500E} M_sun\n" | tee -a ${RES_FINAL} -printf "gas_fraction500= ${FG500E} x100%%\n" | tee -a ${RES_FINAL} -printf "r1500= ${R1500E} kpc\n" | tee -a ${RES_FINAL} -printf "m1500= ${M1500E} M_sun\n" | tee -a ${RES_FINAL} -printf "L1500= ${L1500E} erg/s\n" | tee -a ${RES_FINAL} -printf "gas_m1500= ${MG1500E} M_sun\n" | tee -a ${RES_FINAL} -printf "gas_fraction1500= ${FG1500E} x100%%\n" | tee -a ${RES_FINAL} -printf "r2500= ${R2500E} kpc\n" | tee -a ${RES_FINAL} -printf "m2500= ${M2500E} M_sun\n" | tee -a ${RES_FINAL} -printf "L2500= ${L2500E} erg/s\n" | tee -a ${RES_FINAL} -printf "gas_m2500= ${MG2500E} M_sun\n" | tee -a ${RES_FINAL} -printf "gas_fraction2500= ${FG2500E} x100%%\n" | tee -a ${RES_FINAL} -printf "\n" | tee -a ${RES_FINAL} -printf "gas mass 200= ${MG200E} M_sun\n" | tee -a ${RES_FINAL} -printf "gas fractho 200= ${FG200E} x100%%\n" | tee -a ${RES_FINAL} -printf "gas mass 500= ${MG500E} M_sun\n" | tee -a ${RES_FINAL} -printf "gas fractho 500= ${FG500E} x100%%\n" | tee -a ${RES_FINAL} -printf "gas mass 1500= ${MG1500E} M_sun\n" | tee -a ${RES_FINAL} -printf "gas fractho 1500= ${FG1500E} x100%%\n" | tee -a ${RES_FINAL} -printf "gas mass 2500= ${MG2500E} M_sun\n" | tee -a ${RES_FINAL} -printf "gas fractho 2500= ${FG2500E} x100%%\n" | tee -a ${RES_FINAL} -printf "\n" | tee -a ${RES_FINAL} -$base_path/extract_tcool.py $rcool | tee -a ${RES_FINAL} -$base_path/fg_2500_500.py | tee -a ${RES_FINAL} -printf "\n+++++++++++++++++++++++++++++++++++++++++++++++++++++\n" - 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