diff options
Diffstat (limited to 'mod_ly/fit_dbeta_nfw_mass_profile2.sh')
| -rwxr-xr-x | mod_ly/fit_dbeta_nfw_mass_profile2.sh | 235 |
1 files changed, 0 insertions, 235 deletions
diff --git a/mod_ly/fit_dbeta_nfw_mass_profile2.sh b/mod_ly/fit_dbeta_nfw_mass_profile2.sh deleted file mode 100755 index 13a78dd..0000000 --- a/mod_ly/fit_dbeta_nfw_mass_profile2.sh +++ /dev/null @@ -1,235 +0,0 @@ -#!/bin/sh - -# modified by LIweitaNux, 2012/09/06 -export PATH="/usr/local/bin:/usr/bin:/bin:$PATH" - -if [ $# -eq 1 ]; then - cfg_file="$1" -elif [ $# -eq 2 ]; then - cfg_file="$1" - CENTER_VAL="YES" -else - echo "Usage: $0 <cfg_file> [c]" - exit 1 -fi - -if ! which xspec > /dev/null; then - printf "ERROR: please initialize HEASOFT first\n" - exit 2 -fi - -if [ -z "${HEADAS}" ]; then - printf "ERROR: variable \`HEADAS' not properly set\n" - exit 3 -fi - -export PGPLOT_FONT="${HEADAS}/lib/grfont.dat" -printf "## PGPLOT_FONT: \`${PGPLOT_FONT}'\n" - -if [ "$0" = `basename $0` ]; then - script_path=`which $0` - base_path=`dirname ${script_path}` -else - base_path=`dirname $0` -fi -printf "## base_path: \`${base_path}'\n" -printf "## use configuration file: \`${cfg_file}'\n" - -#initialize profile type name -t_profile_type=`grep '^t_profile' $cfg_file | awk '{print $2}'` -printf "## t_profile_type: \`$t_profile_type'\n" -#initialize data file name -t_data_file=`grep '^t_data_file' $cfg_file | awk '{print $2}'` -t_param_file=`grep '^t_param_file' $cfg_file | awk '{print $2}'` -#initialize sbp config file -sbp_cfg=`grep '^sbp_cfg' $cfg_file | awk '{print $2}'` -#initialize the temperature profile file -T_file=`grep '^T_file' $sbp_cfg | awk '{print $2}'` -cfunc_file=`grep '^cfunc_file' ${sbp_cfg} |awk '{print $2}'` -abund=`grep '^abund' ${cfg_file} |awk '{print $2}'` -nh=`grep '^nh' ${cfg_file} |awk '{print $2}'` -## calc `cm_per_pixel' instead {{{ -# cm_per_pixel=`grep '^cm_per_pixel' $sbp_cfg|awk '{print $2}'` -z=`grep '^z' $sbp_cfg | awk '{ print $2 }'` -cm_per_pixel=`${base_path}/calc_distance ${z} | grep 'cm_per_pixel' | awk '{ print $2 }'` -sed -i'' "s/^cm_per_pixel.*$/cm_per_pixel ${cm_per_pixel}/" ${sbp_cfg} -printf "## redshift: ${z}, cm_per_pixel: ${cm_per_pixel}\n" -## cm_per_pixel }}} -da=`python -c "print($cm_per_pixel/(.492/3600/180*3.1415926))"` -dl=`python -c "print($da*(1+$z)**2)"` -printf "da= ${da}\n" -printf "dl= ${dl}\n" -## sbp {{{ -sbp_data_file=`grep '^sbp_file' $sbp_cfg | awk '{print $2}'` -radius_sbp_file=`grep '^radius_sbp_file' ${cfg_file} | awk '{print $2}'` - -if [ "x$radius_sbp_file" = "x" ]; then - echo "ERROR, must have radius_sbp_file assigned, this file should be a 4-column file, which contains the radius, radius err, sbp, and sbp err" - exit 200 -fi - -TMP_RSBP="_tmp_rsbp.txt" -[ -e "${TMP_RSBP}" ] && rm -f ${TMP_RSBP} -cat ${radius_sbp_file} | sed 's/#.*$//' | grep -Ev '^\s*$' > ${TMP_RSBP} -# mv -f _tmp_rsbp.txt ${radius_sbp_file} -radius_sbp_file="${TMP_RSBP}" -## sbp }}} - -# determine which temperature profile to be used, and fit the T profile {{{ -if [ "$t_profile_type" = "zyy" ]; then - $base_path/fit_zyy_model $t_data_file $t_param_file $cm_per_pixel - # mv -f zyy_dump.qdp ${T_file} - mv -f zyy_dump.qdp zyy_dump_center.qdp -elif [ "$t_profile_type" = "m0603246" ]; then - $base_path/fit_m0603246 $t_data_file $cm_per_pixel - # mv -f m0603246_dump.qdp ${T_file} - mv -f m0603246_dump.qdp m0603246_dump_center.qdp -elif [ "$t_profile_type" = "wang2012" ]; then - $base_path/fit_wang2012_model $t_data_file $t_param_file $cm_per_pixel 2> /dev/null | tee wang2012_center_param.txt - # mv -f wang2012_dump.qdp ${T_file} - cp -fv wang2012_dump.qdp ${T_file} - T_file_center="wang2012_dump_center.qdp" - mv -fv wang2012_dump.qdp ${T_file_center} - mv -fv fit_result.qdp wang2012_fit_center.qdp -elif [ "$t_profile_type" = "allen" ]; then - $base_path/fit_allen_model $t_data_file $cm_per_pixel - # mv -f allen_dump.qdp ${T_file} - mv -f allen_dump.qdp allen_dump_center.qdp -elif [ "$t_profile_type" = "zzl" ]; then - $base_path/fit_zzl_model $t_data_file $t_param_file - # mv -f zzl_dump.qdp ${T_file} - mv -f zzl_dump.qdp zzl_dump_center.qdp -else - printf "ERROR: temperature profile name \`${t_profile_type}' invalid!\n" - exit 10 -fi -# temp profile }}} - -$base_path/coolfunc_calc_bolo.sh ${T_file_center} $abund $nh $z cfunc_bolo.dat -$base_path/coolfunc_calc.sh ${T_file_center} $abund $nh $z $cfunc_file -mv -fv flux_cnt_ratio.txt flux_cnt_ratio_center.txt -# fit sbp (double-beta) -$base_path/fit_dbeta_sbp2 $sbp_cfg 2> /dev/null -mv -fv dbeta_param.txt dbeta_param_center.txt -cat dbeta_param_center.txt -mv -fv sbp_fit.qdp sbp_fit_center.qdp -mv -fv rho_fit.qdp rho_fit_center.qdp -mv -fv rho_fit.dat rho_fit_center.dat -$base_path/fit_nfw_mass mass_int.dat $z 2> /dev/null -mv -fv nfw_param.txt nfw_param_center.txt -mv -fv nfw_fit_result.qdp nfw_fit_center.qdp -mv -fv nfw_dump.qdp mass_int_center.qdp -mv -fv overdensity.qdp overdensity_center.qdp -mv -fv gas_mass_int.qdp gas_mass_int_center.qdp - -#exit 233 - -## cooling time -$base_path/cooling_time rho_fit_center.dat ${T_file_center} cfunc_bolo.dat $dl $cm_per_pixel > cooling_time.dat -## radius to calculate tcool, not the cooling time! -rcool=`$base_path/analyze_mass_profile.py 500 c | grep '^r500' | awk -F "=" '{print .048*$2}'` -printf "rcool= ${rcool}\n" - -## center value {{{ -if [ "${CENTER_VAL}" = "YES" ]; then - $base_path/analyze_mass_profile.py 200 c - $base_path/analyze_mass_profile.py 500 c - $base_path/extract_tcool.py $rcool | tee cooling_time_result.txt - exit 0 -fi -## center value }}} - -# clean previous files -rm -f summary_shuffle_mass_profile.qdp -rm -f summary_overdensity.qdp -rm -f summary_mass_profile.qdp -rm -f summary_gas_mass_profile.qdp - -## count -COUNT=1 - -#100 times of Monte-carlo simulation to determine error -#just repeat above steps -printf "\n+++++++++++++++++++ Monte Carlo +++++++++++++++++++++\n" -for i in `seq 1 100`; do - # echo $t_data_file - $base_path/shuffle_T.py $t_data_file temp_shuffled_t.dat - $base_path/shuffle_sbp.py $sbp_data_file temp_shuffled_sbp.dat - # t_data_file=temp_shuffled_t.dat -#exit - - if [ "$t_profile_type" = "zyy" ]; then - $base_path/fit_zyy_model temp_shuffled_t.dat $t_param_file $cm_per_pixel - mv -f zyy_dump.qdp ${T_file} - elif [ "$t_profile_type" = "m0603246" ]; then - $base_path/fit_m0603246 temp_shuffled_t.dat $cm_per_pixel - mv -f m0603246_dump.qdp ${T_file} - elif [ "$t_profile_type" = "wang2012" ]; then - $base_path/fit_wang2012_model temp_shuffled_t.dat $t_param_file $cm_per_pixel 2> /dev/null - mv -f wang2012_dump.qdp ${T_file} - elif [ "$t_profile_type" = "allen" ]; then - $base_path/fit_allen_model temp_shuffled_t.dat $cm_per_pixel - mv -f allen_dump.qdp ${T_file} - elif [ "$t_profile_type" = "zzl" ]; then - $base_path/fit_zzl_model temp_shuffled_t.dat $t_param_file - mv -f zzl_dump.qdp ${T_file} - else - printf "ERROR: temperature profile name \`${t_profile_type}' invalid!\n" - exit 10 - fi - -#exit - : > temp_sbp.cfg - - cat $sbp_cfg | while read l; do - if echo $l | grep -q 'sbp_file'; then - echo "sbp_file temp_shuffled_sbp.dat" >> temp_sbp.cfg - elif echo $l | grep -q 'T_file'; then - echo "T_file ${T_file}" >> temp_sbp.cfg - else - echo $l >> temp_sbp.cfg - fi - done - - ## count - printf "## ${COUNT} ##\n" - COUNT=`expr ${COUNT} + 1` - printf "## `pwd` ##\n" - $base_path/coolfunc_calc.sh ${T_file} ${abund} ${nh} ${z} ${cfunc_file} - - # double-beta model - $base_path/fit_dbeta_sbp2 temp_sbp.cfg 2> /dev/null - [ -r "dbeta_param.txt" ] && cat dbeta_param.txt - $base_path/fit_nfw_mass mass_int.dat $z 2> /dev/null - cat nfw_dump.qdp >> summary_mass_profile.qdp - echo "no no no" >> summary_mass_profile.qdp - - cat overdensity.qdp >> summary_overdensity.qdp - echo "no no no" >> summary_overdensity.qdp - - cat gas_mass_int.qdp >> summary_gas_mass_profile.qdp - echo "no no no" >> summary_gas_mass_profile.qdp - -done # end `while' -printf "\n+++++++++++++++++++ Monte Carlo +++++++++++++++++++++\n" - -#analys the errors -printf "\n+++++++++++++++ RESULTS (double-beta) +++++++++++++++\n" -RESULT="results_dbeta_mrl.txt" -[ -e "${RESULT}" ] && mv -fv ${RESULT} ${RESULT}_bak - -$base_path/analyze_mass_profile.py 200 | tee -a ${RESULT} -$base_path/analyze_mass_profile.py 500 | tee -a ${RESULT} -$base_path/analyze_mass_profile.py 1500 | tee -a ${RESULT} -$base_path/analyze_mass_profile.py 2500 | tee -a ${RESULT} - -R200_VAL=`grep '^r200' ${RESULT} | awk '{ print $2 }'` -R500_VAL=`grep '^r500' ${RESULT} | awk '{ print $2 }'` -printf "\n## R200: ${R200_VAL}, R500: ${R500_VAL}\n" -L200=`$base_path/calc_lx $radius_sbp_file flux_cnt_ratio_center.txt $z ${R200_VAL} $t_data_file | grep '^Lx' | awk '{ print $2,$3,$4 }'` -L500=`$base_path/calc_lx $radius_sbp_file flux_cnt_ratio_center.txt $z ${R500_VAL} $t_data_file | grep '^Lx' | awk '{ print $2,$3,$4 }'` -printf "L200= ${L200} erg/s\n" | tee -a ${RESULT} -printf "L500= ${L500} erg/s\n" | tee -a ${RESULT} -$base_path/extract_tcool.py $rcool | tee cooling_time_result.txt -printf "\n+++++++++++++++++++++++++++++++++++++++++++++++++++++\n" - |