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# Copyright (c) 2017 Weitian LI <liweitianux@live.com>
# MIT license
#
# Weitian LI
# 2017-02-11
"""
Manage the observation manifest in YAML format.
NOTE
----
Use `ruamel.yaml`_ instead of `PyYAML`_ to preserve the comments
and other structures in the YAML file.
.. _`ruamel.yaml`: https://bitbucket.org/ruamel/yaml
.. _`PyYAML`: http://pyyaml.org/
"""
import os
from collections import OrderedDict
import argparse
import ruamel.yaml
class Manifest:
"""
Manage the observational products manifest.
"""
def __init__(self, filepath):
self.filepath = os.path.abspath(filepath)
self.manifest = ruamel.yaml.load(
open(filepath), Loader=ruamel.yaml.RoundTripLoader)
if self.manifest is None:
self.manifest = ruamel.yaml.comments.CommentedMap()
def dump(self):
return ruamel.yaml.dump(self.manifest,
Dumper=ruamel.yaml.RoundTripDumper)
def save(self):
with open(self.filepath, "w") as f:
f.write(self.dump())
def show(self):
print(self.dump())
def has(self, key):
return True if key in self.manifest else False
def get(self, key):
"""
Get the value of the specified item in the manifest.
Parameters
----------
key : str
The key of the item to be requested.
Raises
------
KeyError :
If the specified item doesn't exist.
"""
if self.has(key):
return self.manifest[key]
else:
raise KeyError("manifest doesn't have item: '%s'" % key)
def gets(self, keys, default=None, splitlist=False):
"""
Get the value of the specified item in the manifest.
Parameters
----------
keys : list[str]
A list of keys specifying the items to be requested.
default : optional
The default value to return if the item not exists.
splitlist : bool, optional
Split the item value if it is a list, making it is easier
to export as CSV format.
Returns
-------
data : `~OrderedDict`
Ordered dictionary containing the requested items.
Returns
-------
"""
data = OrderedDict([
(key, self.manifest.get(key, default)) for key in keys
])
if splitlist:
ds = OrderedDict()
for k, v in data.items():
if isinstance(v, list):
for i, vi in enumerate(v):
ki = "{0}[{1}]".format(k, i)
ds[ki] = vi
else:
ds[k] = v
data = ds
return data
def getpath(self, key, relative=False, sep=None):
"""
Get the absolute path to the specified item by joining
with the location of this manifest file.
Parameters
----------
key : str
Key of the file item
relative : bool, optional
Whether return the file path(s) as relative path w.r.t.
the current working directory?
sep : str, optional
If not ``None``, join the multiple file paths with the
specified separator, instead of returning a list of paths.
"""
value = self.get(key)
cwd = os.getcwd()
if isinstance(value, list):
path = [os.path.join(os.path.dirname(self.filepath), f)
for f in value]
if relative:
path = [os.path.relpath(p, start=cwd) for p in path]
if sep is not None:
path = sep.join(path)
else:
path = os.path.join(os.path.dirname(self.filepath), value)
if relative:
path = os.path.relpath(path, start=cwd)
return path
def set(self, key, value):
"""
Set the value of the specified item in the manifest.
(Will add a new item or update an existing item.)
"""
self.manifest[key] = self.parse_value(value)
self.save()
def setpath(self, key, path):
"""
Get the relative path of the given file w.r.t. this manifest file,
and set it to be the value of the specified item.
(Will add a new item or update an existing item.)
"""
dirname = os.path.dirname(self.filepath)
if isinstance(path, list):
abspath = [os.path.abspath(p) for p in path]
relpath = [os.path.relpath(p, start=dirname) for p in abspath]
if len(relpath) == 1:
relpath = relpath[0]
else:
abspath = os.path.abspath(path)
relpath = os.path.relpath(abspath, start=dirname)
self.manifest[key] = relpath
self.save()
def add(self, key, value):
"""
Add the specified new item in the manifest.
If the specified item already exists, raise a ``KeyError``.
"""
if key in self.manifest:
raise KeyError("manifest already has item: '%s'" % key)
else:
self.set(key, value)
def update(self, key, value):
"""
Update the specified existing item in the manifest.
If the specified item doesn't exist, raise a ``KeyError``.
"""
if key in self.manifest:
self.set(key, value)
else:
raise KeyError("manifest doesn't have item: '%s'" % key)
def delete(self, key):
"""
Delete the specified item from the manifest.
"""
del self.manifest[key]
self.save()
def rename(self, oldkey, newkey):
"""
Rename the specified key in the manifest.
If the specified old key doesn't exist, or the new key already
exists, the error ``KeyError`` is raised.
"""
if oldkey not in self.manifest:
raise KeyError("manifest doesn't have item: '%s'" % oldkey)
if newkey in self.manifest:
raise KeyError("manifest already has item: '%s'" % newkey)
# Add item with the new key
self.manifest[newkey] = self.manifest[oldkey]
# Delete old item
del self.manifest[oldkey]
self.save()
@classmethod
def parse_value(self, value):
"""
Parse the given (list of) value(s) from string.
If the value list only has length of 1, then just return
the only element without list enclosure.
"""
if isinstance(value, list):
pv = [self.parse_value_single(v) for v in value]
if len(pv) == 1:
return pv[0]
else:
return pv
else:
return self.parse_value_single(value)
@staticmethod
def parse_value_single(value):
"""
Try to parse the given value from string to integer, float, boolean
or string.
If the input value is not string, then just ignore the parse.
"""
if not isinstance(value, str):
return value
try:
v = int(value)
except ValueError:
try:
v = float(value)
except ValueError:
# string/boolean
if value.lower() in ["true", "yes"]:
v = True
elif value.lower() in ["false", "no"]:
v = False
else:
v = value # string
return v
def find_manifest(filename="manifest.yaml", startdir=os.getcwd()):
"""
Find the specified manifest file in current directory and
the upper-level directories.
Parameters
----------
filename : str, optional
Filename of the manifest file (default: ``manifest.yaml``)
Returns
-------
filepath : str
Absolute path to the manifest file if found.
Raises
------
FileNotFoundError :
Cannot found the specified manifest
"""
dirname = startdir
filepath = os.path.join(dirname, filename)
while dirname != "/":
if os.path.exists(filepath):
return filepath
# go upper by one level
dirname = os.path.dirname(dirname)
filepath = os.path.join(dirname, filename)
# not found
raise FileNotFoundError("cannot found manifest file: %s" % filename)
def get_manifest(filename="manifest.yaml"):
"""
Find the manifest file and return the Manifest instance of it.
Parameters
----------
filename : str, optional
Filename of the manifest file (default: ``manifest.yaml``)
Returns
-------
manifest : `~Manifest`
Manifest instance of the found manifest file.
"""
return Manifest(find_manifest(filename))
# COMMAND-LINE INTERFACE ----------------------------------------------------
def cmd_show(args, manifest):
"""
Default sub-command "show": Show manifest contents.
"""
manifest.show()
def cmd_get(args, manifest):
"""
Sub-command "get": Get the value of an item in the manifest.
"""
if not args.brief:
print("%s:" % args.key, end=" ")
value = manifest.get(args.key)
if isinstance(value, list):
if args.field:
print(value[args.field-1])
else:
vs = [str(v) for v in value]
print(args.separator.join(vs))
else:
print(value)
def cmd_getpath(args, manifest):
"""
Sub-command "getpath": Get the absolute path to the specified file
item in the manifest.
"""
if not args.brief:
print("%s:" % args.key, end=" ")
path = manifest.getpath(args.key, relative=args.relative,
sep=args.separator)
print(path)
def cmd_set(args, manifest):
"""
Sub-command "set": Set the value of an item in the manifest.
(Will add a new item or update an existing item.)
"""
manifest.set(args.key, args.value)
if not args.brief:
print("Set item '{0}': {1}".format(args.key, manifest.get(args.key)))
def cmd_setpath(args, manifest):
"""
Sub-command "setpath": Set the specified file item in the manifest
to be the relative path of the given file w.r.t. the manifest file.
"""
manifest.setpath(args.key, args.value)
if not args.brief:
print("Set file item '{0}': {1}".format(args.key,
manifest.get(args.key)))
def cmd_add(args, manifest):
"""
Sub-command "add": Add a new item to the manifest.
"""
manifest.add(args.key, args.value)
if not args.brief:
print("Added item '{0}': {1}".format(args.key, manifest.get(args.key)))
def cmd_update(args, manifest):
"""
Sub-command "update": Update the value of an existing item in the
manifest.
"""
value_old = manifest.get(args.key)
manifest.update(args.key, args.value)
if not args.brief:
print("Updated item '{0}': {1} -> {2}".format(
args.key, value_old, manifest.get(args.key)))
def cmd_delete(args, manifest):
"""
Sub-command "delete": Delete an item from the manifest.
"""
manifest.delete(args.key)
if not args.brief:
print("Deleted item: %s" % args.key)
def cmd_rename(args, manifest):
"""
Sub-command "rename": Rename an item in the manifest.
"""
manifest.rename(args.key, args.newkey)
if not args.brief:
print("Renamed item key: '%s' -> '%s'" % (args.key, args.newkey))
def main(description="Manage the observation manifest (YAML format)",
default_file="manifest.yaml"):
parser = argparse.ArgumentParser(description=description)
parser.add_argument("-F", "--file", dest="file", default=default_file,
help="Manifest file (default: %s)" % default_file)
parser.add_argument("-b", "--brief", dest="brief",
action="store_true", help="Be brief")
parser.add_argument("-C", "--directory", dest="directory", default=".",
help="From where to find the manifest file")
parser.add_argument("-s", "--separator", dest="separator", default=" ",
help="Separator to join output list values " +
"(default: whitespace)")
subparsers = parser.add_subparsers(dest="cmd_name",
title="sub-commands",
help="additional help")
# sub-command: show
parser_show = subparsers.add_parser("show", help="Show manifest contents")
parser_show.set_defaults(func=cmd_show)
# sub-command: get
parser_get = subparsers.add_parser("get", help="Get an item from manifest")
parser_get.add_argument("-f", "--field", dest="field", type=int,
help="which field to get (default: all fields)")
parser_get.add_argument("key", help="key of the item")
parser_get.set_defaults(func=cmd_get)
# sub-command: getpath
parser_getpath = subparsers.add_parser(
"getpath", help="Get the path to a file item from manifest")
parser_getpath.add_argument("-r", "--relative", dest="relative",
action="store_true",
help="Return relative path w.r.t. current " +
"working directory instead of absolute path")
parser_getpath.add_argument("key", help="key of the file item")
parser_getpath.set_defaults(func=cmd_getpath)
# sub-command: set
parser_set = subparsers.add_parser(
"set", help="Set (add/update) an item in manifest")
parser_set.add_argument("key", help="key of the item")
parser_set.add_argument("value", nargs="+",
help="value of the item")
parser_set.set_defaults(func=cmd_set)
# sub-command: setpath
parser_setpath = subparsers.add_parser(
"setpath", help="Set a file item using relative path of given files")
parser_setpath.add_argument("key", help="key of the file item")
parser_setpath.add_argument("value", nargs="+",
help="paths to the files")
parser_setpath.set_defaults(func=cmd_setpath)
# sub-command: add
parser_add = subparsers.add_parser(
"add", help="Add a new item to manifest")
parser_add.add_argument("key", help="key of the item")
parser_add.add_argument("value", nargs="+",
help="value of the item")
parser_add.set_defaults(func=cmd_add)
# sub-command: update
parser_update = subparsers.add_parser(
"update", help="Update an existing item in manifest")
parser_update.add_argument("key", help="key of the item")
parser_update.add_argument("value", nargs="+",
help="new value of the item")
parser_update.set_defaults(func=cmd_update)
# sub-command: delete
parser_delete = subparsers.add_parser(
"delete", help="Delete an item from the manifest")
parser_delete.add_argument("key", help="key of the item")
parser_delete.set_defaults(func=cmd_delete)
# sub-command: rename
parser_rename = subparsers.add_parser(
"rename", help="Rename an item in the manifest")
parser_rename.add_argument("key", help="old item key")
parser_rename.add_argument("newkey", help="new item key")
parser_rename.set_defaults(func=cmd_rename)
#
args = parser.parse_args()
if os.path.exists(args.file):
manifest_file = args.file
else:
manifest_file = find_manifest(
args.file, startdir=os.path.abspath(args.directory))
manifest = Manifest(manifest_file)
if args.cmd_name:
# Dispatch sub-commands to call its specified function
args.func(args, manifest)
else:
cmd_show(None, manifest)
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