aboutsummaryrefslogtreecommitdiffstats
path: root/scripts/chandra_gensbpreg.sh
blob: ecc1fe9de462e3f9ec0680b749a8fd7a7a8c164a (plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
#!/bin/sh
##
## This script generate a series of regions for the extraction of
## radial surface brightness profile (SBP).
##
## Regions geneartion algorithm:
## (1) innermost 10 regions, we require a mininal of 5 pixel as well
##     as 50 counts within the 0.7-7.0 keV range.
## (2) following regions: R_out = R_in * 1.2, and require STN > 1.5.
##
## Reference:
## [1] region generate algorithm ??? (TODO)
##
## Author: Zhenghao ZHU
## Created: ??? (TODO)
##
## ChangeLogs:
## v2.1, 2015/02/13, Weitian LI
##   * added '1' to denominators when calculate STN to avoid division by zero
##   * added script description
## v2.0, 2013/03/06, Weitian LI
##   * added the parameter `-t' to print STN results for testing
##

UPDATED="2015/02/13"

# minimal counts
CNT_MIN=50

# energy: 700-7000eV -- channel 49:479
CH_LOW=49
CH_HI=479

# energy 9.5-12keV -- channel 651:822
CH_BKG_LOW=651
CH_BKG_HI=822


if [ $# -lt 6 ]; then
    printf "usage:\n"
    printf "    `basename $0` <evt> <evt_e> <x> <y> <bkg_pi> <reg_out>\n"
    printf "    `basename $0` -t <evt> <evt_e> <x> <y> <bkg_pi> <rin1> ...\n"
    exit 1
fi

if [ "x$1" = "x-t" ] && [ $# -ge 7 ]; then
    EVT=$2
    EVT_E=$3
    X=$4
    Y=$5
    BKGSPC=$6
    # process <rin> ...
    printf "REG -- STN\n"
    while [ ! -z "$7" ]; do
        RIN=$7
        shift
        ROUT=`echo "scale=2; $RIN * 1.2" | bc -l`
        TMP_REG="pie($X,$Y,$RIN,$ROUT,0,360)"
        TMP_SPC="_tmpspc.pi"
        punlearn dmextract
        dmextract infile="${EVT}[sky=${TMP_REG}][bin pi]" outfile=${TMP_SPC} wmap="[energy=300:12000][bin det=8]" clobber=yes
        INDEX_SRC=`dmstat "${TMP_SPC}[channel=${CH_BKG_LOW}:${CH_BKG_HI}][cols counts]" | grep "sum:" | awk '{print $2}'`
        INDEX_BKG=`dmstat "${BKGSPC}[channel=${CH_BKG_LOW}:${CH_BKG_HI}][cols counts]" | grep "sum:" | awk '{print $2}'`
        COUNT_SRC=`dmstat "${TMP_SPC}[channel=${CH_LOW}:${CH_HI}][cols counts]" | grep "sum:" | awk '{print $2}'`
        COUNT_BKG=`dmstat "${BKGSPC}[channel=${CH_LOW}:${CH_HI}][cols counts]" | grep "sum:" | awk '{print $2}'`
        # echo "CNT_SRC: ${COUNT_SRC}, IDX_SRC: ${INDEX_SRC}, CNT_BKG: ${COUNT_BKG}, IDX_BKG: ${INDEX_BKG}"
        # exit
        STN=`echo ${COUNT_SRC} ${INDEX_SRC} ${COUNT_BKG} ${INDEX_BKG} | awk '{ printf("%f",$1/$2/$3*$4) }'`
        printf "${TMP_REG} -- ${STN}\n"
        [ -e "${TMP_SPC}" ] && rm -f ${TMP_SPC}
    done
    # exit
    exit 0
fi

EVT=$1
EVT_E=$2
X=$3
Y=$4
BKGSPC=$5
REG_OUT=$6

[ -f "${REG_OUT}" ] && mv -fv ${REG_OUT} ${REG_OUT}_bak
echo "EVT:      ${EVT}"
echo "EVT_E:    ${EVT_E}"
echo "X:        ${X}"
echo "Y:        ${Y}"
echo "BKGSPC:   ${BKGSPC}"
echo ""

###
printf "## remove dmlist.par dmextract.par\n"
DMLIST_PAR="$HOME/cxcds_param4/dmlist.par"
DMEXTRACT_PAR="$HOME/cxcds_param4/dmextract.par"
[ -f "${DMLIST_PAR}" ] && rm -f ${DMLIST_PAR}
[ -f "${DMEXTRACT_PAR}" ] && rm -f ${DMEXTRACT_PAR}

RIN=0
ROUT=0
CNTS=0
for i in `seq 1 10`; do
    printf "gen reg #$i @ cnts:${CNT_MIN} ...\n"
    ROUT=`expr $RIN + 5`
    TMP_REG="pie($X,$Y,$RIN,$ROUT,0,360)"
    CNTS=`dmlist "${EVT_E}[sky=${TMP_REG}]" blocks | grep 'EVENTS' | awk '{ print $8 }'`
    while [ `echo "$CNTS < $CNT_MIN" | bc -l` -eq 1 ]; do
        ROUT=`expr $ROUT + 1`
        TMP_REG="pie($X,$Y,$RIN,$ROUT,0,360)"
        CNTS=`dmlist "${EVT_E}[sky=${TMP_REG}]" blocks | grep 'EVENTS' | awk '{ print $8 }'`
    done
    TMP_REG="pie($X,$Y,$RIN,$ROUT,0,360)"
    echo "${TMP_REG}" >> ${REG_OUT}
    RIN=$ROUT
done

# last reg width
#REG_W=`tail -n 1 ${REG_OUT} | tr -d '()' | awk -F',' '{ print $4-$3 }'`

RIN=$ROUT
ROUT=`echo "scale=2; $ROUT * 1.2" | bc -l`

STN=10
i=11
STN_FILE="sbp_stn.dat"
[ -e ${STN_FILE} ] && mv -fv ${STN_FILE} ${STN_FILE}_bak
while [ `echo "${STN} > 1.5" | bc -l` -eq 1 ]; do
    printf "gen reg #$i \n"
    i=`expr $i + 1`
    TMP_REG="pie($X,$Y,$RIN,$ROUT,0,360)"
   
    # next reg
    RIN=$ROUT
    ROUT=`echo "scale=2; $ROUT * 1.2" | bc -l`
    TMP_SPC=_tmpspc.pi
    punlearn dmextract
    dmextract infile="${EVT}[sky=${TMP_REG}][bin pi]" outfile=${TMP_SPC} wmap="[energy=300:12000][bin det=8]" clobber=yes
    INDEX_SRC=`dmstat "${TMP_SPC}[channel=${CH_BKG_LOW}:${CH_BKG_HI}][cols counts]" | grep "sum:" | awk '{print $2}'`
    INDEX_BKG=`dmstat "${BKGSPC}[channel=${CH_BKG_LOW}:${CH_BKG_HI}][cols counts]" | grep "sum:" | awk '{print $2}'`

    COUNT_SRC=`dmstat "${TMP_SPC}[channel=${CH_LOW}:${CH_HI}][cols counts]" | grep "sum:" | awk '{print $2}'`
    COUNT_BKG=`dmstat "${BKGSPC}[channel=${CH_LOW}:${CH_HI}][cols counts]" | grep "sum:" | awk '{print $2}'`

    #echo "CNT_SRC: ${COUNT_SRC}, IDX_SRC: ${INDEX_SRC}, CNT_BKG: ${COUNT_BKG}, IDX_BKG: ${INDEX_BKG}"
    #exit 99

    # Add '1' to the denominators to avoid division by zero.
    STN=`echo ${COUNT_SRC} ${INDEX_SRC} ${COUNT_BKG} ${INDEX_BKG} | awk '{ printf("%f", ($1 / ($2 + 1)) / ($3 / ($4 + 1))) }'`
    CNT=`dmlist "${EVT_E}[sky=${TMP_REG}]" blocks | grep 'EVENTS' | awk '{ print $8 }'`
    echo "CNT: ${CNT}"
    echo "CNT_MIN: ${CNT_MIN}"
    if [ `echo "${CNT} < ${CNT_MIN}" | bc -l` -eq 1 ]; then 
        break
    fi
    echo "STN: ${STN}"
    echo "RIN: ${RIN}, ROUT: ${ROUT}" 
    echo "STN: ${STN}" >> ${STN_FILE}
    echo "${TMP_REG}" >> ${REG_OUT}
done