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# Copyright (c) 2016 Weitian LI <liweitianux@live.com>
# MIT license
"""
Grid utilities.
"""
import numpy as np
from scipy import ndimage
import healpy as hp
import numba as nb
from .draw import ellipse
@nb.jit(nopython=True)
def _wrap_longitudes(lon):
"""Wrap the longitudes for values that beyond the valid range [0, 360)"""
lon[lon < 0] += 360
lon[lon >= 360] -= 360
return lon
@nb.jit(nopython=True)
def _wrap_latitudes(lat):
"""Wrap the latitudes for values that beyond the valid range [-90, 90]"""
lat[lat < -90] = -lat[lat < -90] - 180
lat[lat > 90] = -lat[lat > 90] + 180
return lat
def make_coordinate_grid(center, size, resolution):
"""Make a rectangle, Cartesian coordinate grid.
Parameters
----------
center : 2-float tuple
Center coordinate (longitude, latitude) of the grid,
with longitude [0, 360) degree, latitude [-90, 90] degree.
size : float, or 2-float tuple
The sizes (size_lon, size_lat) of the grid along the longitude
and latitude directions. If only one float specified, then the
grid is square.
resolution : float
The grid resolution, unit [ degree ].
Returns
-------
lon : 2D `~numpy.ndarray`
The array with elements representing the longitudes of each grid
pixel. The array is odd-sized, with the input center locating at
the exact grid central pixel.
Also, the longitudes are fixed to be in the valid range [0, 360).
lat : 2D `~numpy.ndarray`
The array with elements representing the latitudes of each grid
pixel.
Also, the latitudes are fixed to be in the valid range [-90, 90].
"""
lon0, lat0 = center
try:
size_lon, size_lat = size
except (TypeError, ValueError):
size_lon = size_lat = size
# Half number of pixels (excluding the center)
hn_lon = np.ceil(0.5*size_lon / resolution).astype(np.int)
hn_lat = np.ceil(0.5*size_lat / resolution).astype(np.int)
idx_lon = lon0 + np.arange(-hn_lon, hn_lon+1) * resolution
idx_lat = lat0 + np.arange(-hn_lat, hn_lat+1) * resolution
# Fix the longitudes and latitudes to be in the valid ranges
idx_lon = _wrap_longitudes(idx_lon)
idx_lat = _wrap_latitudes(idx_lat)
lon, lat = np.meshgrid(idx_lon, idx_lat)
return (lon, lat)
@nb.jit(nb.types.UniTuple(nb.float64[:, :], 2)(
nb.float64, nb.float64, nb.float64, nb.float64, nb.float64),
nopython=True)
def make_coordinate_grid_fast(lon_c, lat_c, size_lon, size_lat, resolution):
"""Make a rectangle, Cartesian coordinate grid.
This is the ``numba.jit`` optimized version of ``make_coordinate_grid``.
Parameters
----------
lon_c, lat_c : float
The longitude and latitude of the center coordinate,
with longitude [0, 360) degree, latitude [-90, 90] degree.
size_lon, size_lat : float
The sizes of the grid along the longitude and latitude directions.
resolution : float
The grid resolution, unit [ degree ].
Returns
-------
lon : 2D `~numpy.ndarray`
The array with elements representing the longitudes of each grid
pixel. The array is odd-sized, with the input center locating at
the exact grid central pixel.
Also, the longitudes are fixed to be in the valid range [0, 360).
lat : 2D `~numpy.ndarray`
The array with elements representing the latitudes of each grid
pixel.
Also, the latitudes are fixed to be in the valid range [-90, 90].
"""
# Half number of pixels (excluding the center)
hn_lon = int(np.ceil(0.5*size_lon / resolution))
hn_lat = int(np.ceil(0.5*size_lat / resolution))
idx_lon = lon_c + np.arange(-hn_lon, hn_lon+1) * resolution
idx_lat = lat_c + np.arange(-hn_lat, hn_lat+1) * resolution
# Fix the longitudes and latitudes to be in the valid ranges
idx_lon = _wrap_longitudes(idx_lon)
idx_lat = _wrap_latitudes(idx_lat)
# ``numpy.meshgrid`` currently not supported by ``numba``
shape = (len(idx_lat), len(idx_lon))
lon = np.zeros(shape)
for i in range(shape[0]):
lon[i, :] = idx_lon
lat = np.zeros(shape)
for i in range(shape[1]):
lat[:, i] = idx_lat
return (lon, lat)
def make_grid_ellipse(center, size, resolution, rotation=None):
"""Make a square coordinate grid just containing the specified
(rotated) ellipse.
Parameters
----------
center : 2-float tuple
Center coordinate (longitude, latitude) of the grid,
with longitude [0, 360) degree, latitude [-90, 90] degree.
size : 2-float tuple
The (major, minor) axes of the filling ellipse, unit [ degree ].
resolution : float
The grid resolution, unit [ degree ].
rotation : float, optional
The rotation angle (unit [ degree ]) of the filling ellipse.
Returns
-------
lon : 2D `~numpy.ndarray`
The array with elements representing the longitudes of each grid
pixel. The array is odd-sized and square, with the input center
locating at the exact grid central pixel.
Also, the longitudes are fixed to be in the valid range [0, 360).
lat : 2D `~numpy.ndarray`
The array with elements representing the latitudes of each grid
pixel.
Also, the latitudes are fixed to be in the valid range [-90, 90].
gridmap : 2D float `~numpy.ndarray`
The array containing the specified ellipse, where the pixels
corresponding to the ellipse with positive values, while other pixels
are zeros.
This array is rotated from the nominal ellipse of value ones,
therefore the edges of the rotated ellipse is in fraction (0-1),
which can be regarded as similar to the sub-pixel rendering.
NOTE
----
The generated grid is square, determined by the major axis of the ellipse,
therefore, we can simply rotate the ellipse without reshaping.
"""
size_major = max(size)
lon, lat = make_coordinate_grid_fast(center[0], center[1],
size_major, size_major, resolution)
shape = lon.shape
# Fill the ellipse into the grid
r0, c0 = np.floor(np.array(shape) / 2.0).astype(np.int)
r_radius, c_radius = np.ceil(0.5*np.array(size)/resolution).astype(np.int)
rr, cc = ellipse(r0, c0, r_radius, c_radius, shape=shape)
gridmap = np.zeros(shape)
gridmap[rr, cc] = 1.0
if rotation is not None:
# Rotate the ellipse
gridmap = ndimage.rotate(gridmap, angle=rotation, order=1,
reshape=False)
return (lon, lat, gridmap)
def map_grid_to_healpix(grid, nside):
"""Map the filled coordinate grid to the HEALPix map (RING ordering).
Parameters
----------
grid : 3-element tuple
A 3-element tuple `(lon, lat, gridmap)` that specifies the coordinate
grid to be mapped, where `lon` and `lat` are the longitudes and
latitudes of the grid pixels, and `gridmap` is the image to be
mapped to the HEALPix map.
nside : int
Nside of the output HEALPix map.
Returns
-------
indexes : 1D `~numpy.ndarray`
The indexes of the effective HEALPix pixels that are mapped from
the input coordinate grid. The indexes are in RING ordering.
values : 1D `~numpy.ndarray`
The values of each output HEALPix pixel with respect the above
indexes.
NOTE
----
Generally, the input coordinate grid has higher resolution than the
output HEALPix map, so down-sampling is performed by averaging the
pixels that map to the same HEALPix pixel.
However, note that the total flux is *NOT PRESERVED* for the mapping
(or reprojection) procedure.
XXX/TODO:
- Implement the flux-preserving algorithm (reference ???)
"""
lon, lat, gridmap = grid
phi = np.radians(lon)
theta = np.radians(90.0 - lat)
ipix = hp.ang2pix(nside, theta, phi, nest=False)
# Get the corresponding input grid pixels for each HEALPix pixel
indexes, counts = np.unique(ipix, return_counts=True)
shape = (len(indexes), max(counts))
datamap = np.zeros(shape) * np.nan
# TODO: how to avoid this explicit loop ??
for i, idx in enumerate(indexes):
pixels = gridmap[ipix == idx]
datamap[i, :len(pixels)] = pixels
values = np.nanmean(datamap, axis=1)
return (indexes, values)
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