Removed analyze_path.sh and build_sample.sh

2 files changed, 0 insertions, 235 deletions

diff --git a/analyze_path.sh b/analyze_path.sh
deleted file mode 100755
index 2a9d510..0000000
--- a/analyze_path.sh
+++ /dev/null
@@ -1,61 +0,0 @@
-#!/bin/sh
-
-analyze_path() {
-    # extract `obs id' and `source name' from path
-    echo "$@" | awk '
-    # main part
-    {
-        if (NF==1) {
-            ## oi & name
-            input=($1 "/")
-            if (input ~ /_oi/) {
-                ## PATTERN: .../$name_oi$oi/...
-                idx_oi = match(input, /oi[0-9]+/) + 2;    # "2" skip the "oi"
-                len_oi = RLENGTH - 2;
-                oi = substr(input, idx_oi, len_oi);
-                idx_name = match(input, /\/[a-zA-Z0-9.+-]+_oi/) + 1;
-                len_name = RLENGTH - 4;
-                name = substr(input, idx_name, len_name);
-                owner = "lwt";
-            }
-            else {
-                ## PATTERN: .../$name/$oi/...
-                idx_oi = match(input, /\/[0-9]+\//) + 1;
-                len_oi = RLENGTH - 2;
-                oi = substr(input, idx_oi, len_oi);
-                idx_name1 = match(input, /\/[a-zA-Z0-9_.+-]+\/[0-9]+\//);
-                len_name1 = RLENGTH;
-                name1 = substr(input, idx_name1, len_name1);
-                idx_name = match(name1, /\/[a-zA-Z0-9_.+-]+\//) + 1;
-                len_name = RLENGTH - 2;
-                name = substr(name1, idx_name, len_name);
-                owner = "zzh";
-            }
-            ## output
-            printf("input: %s\n", input)
-            printf("oi: %s\nname: %s\nowner: %s\n", oi, name, owner)
-        }
-        else {
-            printf("*** WARNING: invalid input: %s\n", $0)
-        }
-    }
-    # END { }
-    '
-}
-
-
-case "$1" in
-    -[hH]*)
-        echo "Usage:"
-        echo "    `basename $0` [ path ]"
-        exit 1
-        ;;
-esac
-
-if [ -z "$1" ]; then
-    DIR="${PWD}"
-else
-    DIR="$1"
-fi
-
-analyze_path "${DIR}"
diff --git a/build_sample.sh b/build_sample.sh
deleted file mode 100755
index 70263d1..0000000
--- a/build_sample.sh
+++ /dev/null
@@ -1,174 +0,0 @@
-#!/bin/sh
-#
-# Build and/or update the sample of studying central X-ray brightness
-# excess, by only copying/updating the required products from our complete
-# mass sample.
-#
-# Aaron LI
-# Created: 2016-03-02
-# Updated: 2016-06-06
-#
-# Change log:
-# 2016-06-06:
-#   * Add argument "OWNER"
-#   * Split out function "copy_mass_files()"
-#   * Copy the `mass` related files
-# 2016-04-26:
-#   * Add flag "UPDATE_MODE"
-#   * Choose the correct `img` directory for ZZH's data
-#   * Simplify the argument processing
-# 2016-04-15:
-#   * Replace "_" with "-" in NAME
-#   * Add support for zzh's sample
-#
-
-analyze_path() {
-    # extract `obs_id' and `source name' from path
-    echo "$@" | awk '
-    # main part
-    {
-        if (NF==1) {
-            ## oi & name
-            input=($1 "/")
-            if (input ~ /_oi/) {
-                ## PATTERN: .../$name_oi$oi/...
-                idx_oi = match(input, /oi[0-9]+/) + 2;    # "2" skip the "oi"
-                len_oi = RLENGTH - 2;
-                oi = substr(input, idx_oi, len_oi);
-                idx_name = match(input, /\/[a-zA-Z0-9.+-]+_oi/) + 1;
-                len_name = RLENGTH - 4;
-                name = substr(input, idx_name, len_name);
-                owner = "lwt";
-            }
-            else {
-                ## PATTERN: .../$name/$oi/...
-                idx_oi = match(input, /\/[0-9]+\//) + 1;
-                len_oi = RLENGTH - 2;
-                oi = substr(input, idx_oi, len_oi);
-                idx_name1 = match(input, /\/[a-zA-Z0-9_.+-]+\/[0-9]+\//);
-                len_name1 = RLENGTH;
-                name1 = substr(input, idx_name1, len_name1);
-                idx_name = match(name1, /\/[a-zA-Z0-9_.+-]+\//) + 1;
-                len_name = RLENGTH - 2;
-                name = substr(name1, idx_name, len_name);
-                owner = "zzh";
-            }
-            ## output
-            printf("input: %s\n", input)
-            printf("oi: %s\nname: %s\nowner: %s\n", oi, name, owner)
-        }
-        else {
-            printf("*** WARNING: invalid input: %s\n", $0)
-        }
-    }
-    # END { }
-    '
-}
-
-
-# copy mass-related files
-copy_mass_files() {
-    _mass_dir="$1"
-    _target_dir="$2"
-    _owner="$3"
-    ( \
-        cd ${repro_dir}/mass; \
-        if [ "${_owner}" = "lwt" ]; then \
-            cp -av fitting_*.conf global.cfg wang2012_param.txt \
-               flux_sbp.txt radius_sbp.txt sbprofile.txt \
-               [a-z]*_center.* summary_*.* final_result.txt \
-               ${target_dir}/; \
-            cp -Lv tcl_temp_profile.txt ${target_dir}/; \
-        else \
-            cp -av global.cfg sbp.cfg param_wang.txt \
-               [a-z]*_center.* summary_*.* \
-               final_result.txt ${target_dir}/; \
-            cp -Lv Tprofile.dat radius.dat sbp2.dat sbp3.dat ${target_dir}/; \
-        fi; \
-    )
-    unset _mass_dir _target_dir _owner
-}
-
-
-case "$1" in
-    -[hH]*)
-        echo "Usage:"
-        echo "    `basename $0` <lwt|zzh> <dest_root_dir> <repro_dir1> ..."
-        exit 1
-        ;;
-esac
-
-UPDATE_MODE="YES"
-
-OWNER="$1"
-DEST_ROOT="$2"
-if [ -n "${UPDATE_MODE}" -a ! -d "${DEST_ROOT}" ]; then
-    echo "UPDATE MODE: '${DEST_ROOT}' dose not exist"
-    exit 2
-fi
-[ ! -d  "${DEST_ROOT}" ] && mkdir -v "${DEST_ROOT}"
-
-INIT_DIR=`pwd -P`
-while [ ! -z "$3" ]; do
-    repro_dir="$3"
-    shift
-    OI=`analyze_path "${repro_dir}" | grep '^oi:' | awk '{ print $2 }'`
-    NAME=`analyze_path "${repro_dir}" | grep '^name:' | awk '{ print $2 }'`
-    # avoid "_" in name
-    NAME=`echo "${NAME}" | tr '_' '-'`
-    echo "********* ${NAME}_oi${OI} *********"
-    # create directories
-    DEST="${DEST_ROOT}/${NAME}_oi${OI}"
-    if [ -n "${UPDATE_MODE}" -a ! -d "${DEST}/repro" ]; then
-        # skip if dest repro directory does not exist
-        echo "Skipped!"
-        continue
-    fi
-    [ ! -d "${DEST}/repro" ] && mkdir -pv ${DEST}/repro
-    cd "${DEST}/repro"
-    # copy the re-processed evt2 files
-    cp -av ${repro_dir}/acisf*.fits .
-    cp -av ${repro_dir}/acisf*.lis ${repro_dir}/pcadf*.fits .
-    # copy the INFO.json file if present
-    cp -av ${repro_dir}/*_INFO.json .
-    # copy the cleaned evt2 files and background files
-    cp -av ${repro_dir}/evt .
-    cp -av ${repro_dir}/bkg .
-    # copy the `img` directory
-    if [ "${OWNER}" = "lwt" ]; then
-        cp -av ${repro_dir}/img .
-    elif [ "${OWNER}" = "zzh" ]; then
-        img_dir="${repro_dir}/../evt2/img"
-        if [ -f "${img_dir}/sbprofile.txt" ]; then
-            cp -av ${img_dir} .
-            cp -av ${repro_dir}/../evt2/spc/profile/rspec.reg ./img/
-        else
-            echo "WARNING: '${img_dir}/sbprofile.txt' does not exists"
-            cp -av ${repro_dir}/img .
-        fi
-    else
-        echo "ERROR: unknown source owner: ${OWNER}"
-    fi
-    # copy the `mass` related files
-    mkdir ./mass
-    cd ./mass
-    target_dir=`pwd -P`
-    if [ "${OWNER}" = "lwt" ]; then
-        copy_mass_files ${repro_dir}/mass ${target_dir} ${OWNER}
-    elif [ "${OWNER}" = "zzh" ]; then
-        if [ -d "${mass_dir}/../evt2/mass" ]; then
-            copy_mass_files ${repro_dir}/../evt2/mass ${target_dir} ${OWNER}
-        elif [ -d "${repro_dir}/mass" ]; then
-            copy_mass_files ${repro_dir}/mass ${target_dir} ${OWNER}
-        else
-            echo "ERROR: no mass directory found!"
-        fi
-    else
-        echo "ERROR: unknown source owner: ${OWNER}"
-    fi
-    cd ${target_dir}
-    # clean up the copied products
-    find . \( -iname '*_bak' -o -iname '_tmp*' \) -delete
-    find . -type l -iname '*.dat' -delete
-    cd ${INIT_DIR}
-done